Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm25876-201ENSMUST00000104329 119 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm13581-201ENSMUST00000120675 278 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm11430-201ENSMUST00000121317 217 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm23887-201ENSMUST00000122683 172 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm22839-201ENSMUST00000158436 304 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Mir5136-201ENSMUST00000175573 76 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm20660-201ENSMUST00000177515 289 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm45023-201ENSMUST00000207951 379 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm45452-201ENSMUST00000210905 177 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm6030-201ENSMUST00000078768 402 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm24150-201ENSMUST00000082759 104 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Mir465c-1-201ENSMUST00000093560 81 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.13□□□□□ -1.91
Ctr9Q62018 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ctr9Q62018 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm26384-201ENSMUST00000102183 110 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Mir542-201ENSMUST00000102186 85 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Mir344c-201ENSMUST00000103919 92 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm11490-201ENSMUST00000118128 272 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm8858-201ENSMUST00000118259 342 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm14793-201ENSMUST00000118739 311 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm14887-201ENSMUST00000119522 663 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm15112-201ENSMUST00000120152 860 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm13720-201ENSMUST00000120741 196 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm25365-201ENSMUST00000158852 121 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Snord53-201ENSMUST00000175146 78 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Mir3066-201ENSMUST00000175296 83 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm24925-201ENSMUST00000178157 107 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm23619-201ENSMUST00000178411 94 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm25474-201ENSMUST00000179052 94 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm22047-201ENSMUST00000179176 94 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm27999-201ENSMUST00000183539 193 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm28283-201ENSMUST00000185509 178 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ctr9Q62018 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm37281-201ENSMUST00000192412 439 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm18956-201ENSMUST00000192857 480 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm43556-201ENSMUST00000196186 681 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm19457-201ENSMUST00000200995 448 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm43224-201ENSMUST00000201567 898 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm45173-201ENSMUST00000206819 305 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm45522-201ENSMUST00000210784 166 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ctr9Q62018 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ctr9Q62018 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.12□□□□□ -1.91
Ctr9Q62018 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm14751-201ENSMUST00000117693 222 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm14129-201ENSMUST00000122436 291 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm5958-201ENSMUST00000147698 297 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm24393-201ENSMUST00000158135 97 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm23415-201ENSMUST00000175519 83 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Mir6382-201ENSMUST00000184055 110 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Mir6917-201ENSMUST00000184111 61 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm27330-201ENSMUST00000184689 132 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm28925-201ENSMUST00000188586 168 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm37727-201ENSMUST00000191637 819 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm38044-201ENSMUST00000192964 487 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm44181-201ENSMUST00000203106 483 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.11□□□□□ -1.91
Ctr9Q62018 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm18703-201ENSMUST00000215318 333 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm2628-201ENSMUST00000218019 426 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm20304-201ENSMUST00000218168 444 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 AC153526.1-201ENSMUST00000219750 190 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm23264-201ENSMUST00000083372 107 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm22740-201ENSMUST00000083439 109 ntBASIC3.11□□□□□ -1.91
Ctr9Q62018 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.11□□□□□ -1.91
Ctr9Q62018 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm13356-201ENSMUST00000121678 335 ntBASIC3.1□□□□□ -1.91
Ctr9Q62018 Gm23599-201ENSMUST00000157261 251 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms