Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm23152-201ENSMUST00000175322 116 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm25535-201ENSMUST00000175364 125 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm24365-201ENSMUST00000175384 125 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm44310-201ENSMUST00000175424 126 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm22639-201ENSMUST00000175591 125 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm22910-201ENSMUST00000178568 132 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm24979-201ENSMUST00000178626 126 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm24264-201ENSMUST00000179835 94 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm28002-201ENSMUST00000184832 100 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm27743-201ENSMUST00000185136 126 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm19620-201ENSMUST00000195972 434 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ift88Q61371 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm45539-201ENSMUST00000210313 428 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.65□□□□□ -1.83
Ift88Q61371 Gm2436-201ENSMUST00000219562 774 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm25079-201ENSMUST00000082529 203 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ift88Q61371 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ift88Q61371 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ift88Q61371 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ift88Q61371 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ift88Q61371 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm12902-201ENSMUST00000118389 322 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm14119-201ENSMUST00000119511 235 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm12779-201ENSMUST00000121496 143 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm14581-201ENSMUST00000121726 198 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.64□□□□□ -1.83
Ift88Q61371 Gm16354-201ENSMUST00000155376 150 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm22516-201ENSMUST00000158266 124 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm15900-201ENSMUST00000161584 342 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm26141-201ENSMUST00000175299 126 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm20656-201ENSMUST00000176925 518 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ift88Q61371 Gm26180-201ENSMUST00000179942 107 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.64□□□□□ -1.83
Ift88Q61371 Mir6963-201ENSMUST00000183535 71 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Mir6413-201ENSMUST00000184049 108 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm19637-201ENSMUST00000185933 579 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm29064-201ENSMUST00000187014 813 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm29704-201ENSMUST00000196011 253 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.64□□□□□ -1.83
Ift88Q61371 Mir691-201ENSMUST00000199719 78 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.64□□□□□ -1.83
Ift88Q61371 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm4987-201ENSMUST00000078326 408 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Gm25512-201ENSMUST00000083863 107 ntBASIC3.64□□□□□ -1.83
Ift88Q61371 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ift88Q61371 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ift88Q61371 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ift88Q61371 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ift88Q61371 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ift88Q61371 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Ift88Q61371 Gm24125-201ENSMUST00000104105 137 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Mir1198-201ENSMUST00000116995 121 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm15783-201ENSMUST00000117521 633 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm13510-201ENSMUST00000118659 429 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.63□□□□□ -1.83
Ift88Q61371 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.63□□□□□ -1.83
Ift88Q61371 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm23169-201ENSMUST00000157157 112 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm22791-201ENSMUST00000157232 145 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm25339-201ENSMUST00000157458 232 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm23782-201ENSMUST00000157939 120 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm22434-201ENSMUST00000158549 122 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm24737-201ENSMUST00000158861 100 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Ift88Q61371 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.63□□□□□ -1.83
Ift88Q61371 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Ift88Q61371 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.63□□□□□ -1.83
Ift88Q61371 Gm18433-202ENSMUST00000195682 196 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ift88Q61371 Gm44041-201ENSMUST00000203678 396 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm44657-201ENSMUST00000208568 450 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.63□□□□□ -1.83
Ift88Q61371 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Gm46369-201ENSMUST00000221577 401 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.63□□□□□ -1.83
Ift88Q61371 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Ift88Q61371 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.62□□□□□ -1.83
Ift88Q61371 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.62□□□□□ -1.83
Ift88Q61371 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ift88Q61371 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Ift88Q61371 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Ift88Q61371 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms