Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CtcfQ61164 Gm29490-201ENSMUST00000190923 342 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm29192-201ENSMUST00000190942 377 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm42536-201ENSMUST00000197562 1613 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CtcfQ61164 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CtcfQ61164 Gm45590-201ENSMUST00000209715 262 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CtcfQ61164 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CtcfQ61164 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
CtcfQ61164 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CtcfQ61164 AC166358.10-201ENSMUST00000220556 144 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcfQ61164 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CtcfQ61164 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcfQ61164 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CtcfQ61164 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CtcfQ61164 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CtcfQ61164 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Gm23530-201ENSMUST00000104564 137 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Mir291a-201ENSMUST00000104815 82 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.56□□□□□ -1.84
CtcfQ61164 Gm14101-201ENSMUST00000121502 473 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm25365-201ENSMUST00000158852 121 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Gm17186-201ENSMUST00000171742 456 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Gm27013-201ENSMUST00000182441 1024 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.56□□□□□ -1.84
CtcfQ61164 Gm43652-201ENSMUST00000196219 675 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm45232-201ENSMUST00000207811 162 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm7675-201ENSMUST00000208828 686 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.56□□□□□ -1.84
CtcfQ61164 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 AC154390.1-201ENSMUST00000225629 277 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm24268-201ENSMUST00000082990 110 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Snord38a-201ENSMUST00000083746 71 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm26107-201ENSMUST00000083972 107 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.56□□□□□ -1.84
CtcfQ61164 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CtcfQ61164 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.55□□□□□ -1.84
CtcfQ61164 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CtcfQ61164 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CtcfQ61164 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CtcfQ61164 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
CtcfQ61164 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
CtcfQ61164 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm13873-201ENSMUST00000119208 427 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm15142-201ENSMUST00000121013 856 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm22957-201ENSMUST00000122511 123 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm23183-201ENSMUST00000122595 323 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.55□□□□□ -1.84
CtcfQ61164 Gm23124-201ENSMUST00000157650 107 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm23852-201ENSMUST00000158376 77 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm10075-201ENSMUST00000162030 545 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm25397-201ENSMUST00000176951 92 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CtcfQ61164 Gm23003-201ENSMUST00000179948 107 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CtcfQ61164 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm27999-201ENSMUST00000183539 193 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm18429-201ENSMUST00000198707 421 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm26379-202ENSMUST00000200225 132 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm42475-201ENSMUST00000201212 295 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm44989-201ENSMUST00000204749 217 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm45312-201ENSMUST00000210566 311 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.55□□□□□ -1.84
CtcfQ61164 Gm46193-201ENSMUST00000219399 364 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CtcfQ61164 Gm10237-201ENSMUST00000078393 273 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm23925-201ENSMUST00000082471 132 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Snora7a-201ENSMUST00000082629 140 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm23850-201ENSMUST00000083830 169 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Gm3867-201ENSMUST00000086108 279 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CtcfQ61164 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CtcfQ61164 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CtcfQ61164 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CtcfQ61164 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.55□□□□□ -1.84
CtcfQ61164 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms