Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trav3-3Q5R1C3 Gm26458-201ENSMUST00000082832 128 ntBASIC1.93□□□□□ -2.1
Trav3-3Q5R1C3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Trav3-3Q5R1C3 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm15844-201ENSMUST00000118016 576 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm13640-201ENSMUST00000118445 264 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm15497-201ENSMUST00000119137 551 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm11229-201ENSMUST00000121993 437 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm24908-201ENSMUST00000157294 127 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm25427-201ENSMUST00000157605 103 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm22611-201ENSMUST00000158288 150 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm28637-201ENSMUST00000179424 345 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm44818-201ENSMUST00000206608 358 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm25592-201ENSMUST00000082635 131 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm26494-201ENSMUST00000083154 143 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm23727-201ENSMUST00000083352 164 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm24493-201ENSMUST00000083805 143 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm6185-201ENSMUST00000193379 3553 ntBASIC1.92□□□□□ -2.1
Trav3-3Q5R1C3 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm12044-201ENSMUST00000120335 213 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm12096-201ENSMUST00000121149 829 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm24911-201ENSMUST00000157292 136 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm25339-201ENSMUST00000157458 232 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm22083-201ENSMUST00000157586 102 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Mir3964-201ENSMUST00000174898 74 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm24304-201ENSMUST00000177635 107 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm26991-201ENSMUST00000180950 620 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm27786-201ENSMUST00000184337 70 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Trbv6-201ENSMUST00000193743 276 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm43402-201ENSMUST00000197159 159 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm43171-201ENSMUST00000199882 291 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm45101-201ENSMUST00000208327 232 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 AC107757.3-201ENSMUST00000226312 535 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm22247-201ENSMUST00000082476 131 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm22974-201ENSMUST00000083301 103 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 AF357428-201ENSMUST00000083815 69 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm5670-201ENSMUST00000093546 372 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.91□□□□□ -2.1
Trav3-3Q5R1C3 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm14292-201ENSMUST00000118761 456 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm16355-201ENSMUST00000128606 231 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm24190-201ENSMUST00000157976 216 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 AC154297.1-201ENSMUST00000171334 397 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Mir7242-201ENSMUST00000183710 79 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Mir6926-201ENSMUST00000184562 68 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm37807-201ENSMUST00000194310 190 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm43286-201ENSMUST00000197420 424 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm18748-201ENSMUST00000198507 622 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm18000-201ENSMUST00000212153 800 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm23516-201ENSMUST00000093728 107 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm23741-201ENSMUST00000097237 171 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 AC122887.2-201ENSMUST00000219465 1603 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.9□□□□□ -2.11
Trav3-3Q5R1C3 Gm14629-201ENSMUST00000122428 144 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm26256-201ENSMUST00000122499 186 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm25321-201ENSMUST00000122558 102 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms