Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm25816-201ENSMUST00000179764 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25939-201ENSMUST00000179876 191 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26189-201ENSMUST00000179879 107 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26188-201ENSMUST00000179963 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26433-201ENSMUST00000180227 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23648-201ENSMUST00000180301 107 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm22128-201ENSMUST00000180346 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm44395-201ENSMUST00000197056 153 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25131-201ENSMUST00000082653 151 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23444-201ENSMUST00000082922 191 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26055-201ENSMUST00000083038 107 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23506-201ENSMUST00000083077 107 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Mir222-201ENSMUST00000083537 79 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm15110-201ENSMUST00000117545 881 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm14363-201ENSMUST00000122304 409 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25283-201ENSMUST00000157272 77 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm17154-201ENSMUST00000165748 431 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24757-201ENSMUST00000176987 371 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm27582-201ENSMUST00000184084 126 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Mir7026-201ENSMUST00000184384 67 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Mir6363-201ENSMUST00000184880 114 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm18448-201ENSMUST00000186286 599 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm29600-201ENSMUST00000188687 377 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm44308-201ENSMUST00000197080 99 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45395-201ENSMUST00000209891 559 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45772-201ENSMUST00000212961 240 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 AC113305.1-201ENSMUST00000214664 724 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm46136-201ENSMUST00000214730 565 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25636-201ENSMUST00000082666 133 ntBASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Trav8d-2Q5R1B6 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.34□□□□□ -2.04
Trav8d-2Q5R1B6 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm13614-201ENSMUST00000117306 503 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm9009-201ENSMUST00000117321 326 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm14020-201ENSMUST00000118165 662 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm14713-201ENSMUST00000122362 686 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm16354-201ENSMUST00000155376 150 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm26277-201ENSMUST00000157097 152 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm25637-201ENSMUST00000157529 107 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm3102-201ENSMUST00000164236 489 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm17162-201ENSMUST00000168538 473 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm3104-201ENSMUST00000171004 473 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm25194-201ENSMUST00000177987 79 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm25874-201ENSMUST00000178030 79 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm3852-201ENSMUST00000182781 264 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm27470-201ENSMUST00000184070 210 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Gm33571-201ENSMUST00000193271 657 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Mir497-201ENSMUST00000200557 84 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 AC124729.1-202ENSMUST00000225587 938 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trav8d-2Q5R1B6 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trav8d-2Q5R1B6 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trav8d-2Q5R1B6 Gm25377-201ENSMUST00000104334 129 ntBASIC2.32□□□□□ -2.04
Trav8d-2Q5R1B6 Gm13085-201ENSMUST00000118356 171 ntBASIC2.32□□□□□ -2.04
Trav8d-2Q5R1B6 Gm5646-201ENSMUST00000120568 714 ntBASIC2.32□□□□□ -2.04
Trav8d-2Q5R1B6 Gm25807-201ENSMUST00000122783 305 ntBASIC2.32□□□□□ -2.04
Trav8d-2Q5R1B6 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms