Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.54□□□□□ -2
Usp28Q5I043 Gm24897-201ENSMUST00000179033 107 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Gm27161-201ENSMUST00000183960 562 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Gm27470-201ENSMUST00000184070 210 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Gm2719-201ENSMUST00000191929 444 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.54□□□□□ -2
Usp28Q5I043 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Gm45658-201ENSMUST00000209197 580 ntBASIC2.54□□□□□ -2
Usp28Q5I043 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.54□□□□□ -2
Usp28Q5I043 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.54□□□□□ -2
Usp28Q5I043 Gm23932-201ENSMUST00000082914 107 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Gm24610-201ENSMUST00000083270 109 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Snora69-201ENSMUST00000083708 131 ntBASIC2.54□□□□□ -2
Usp28Q5I043 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.54□□□□□ -2
Usp28Q5I043 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Usp28Q5I043 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Usp28Q5I043 Gm24430-201ENSMUST00000104077 104 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm6587-201ENSMUST00000120219 613 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm12721-201ENSMUST00000120621 268 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm23886-201ENSMUST00000122684 313 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.53□□□□□ -2
Usp28Q5I043 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.53□□□□□ -2
Usp28Q5I043 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.53□□□□□ -2
Usp28Q5I043 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.53□□□□□ -2
Usp28Q5I043 Gm17183-201ENSMUST00000171170 493 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.53□□□□□ -2
Usp28Q5I043 Mir5136-201ENSMUST00000175573 76 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
Usp28Q5I043 Gm22584-201ENSMUST00000177935 92 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Usp28Q5I043 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.53□□□□□ -2
Usp28Q5I043 Gm27532-201ENSMUST00000183726 113 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC2.53□□□□□ -2
Usp28Q5I043 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC2.53□□□□□ -2
Usp28Q5I043 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC2.53□□□□□ -2
Usp28Q5I043 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC2.53□□□□□ -2
Usp28Q5I043 Gm43652-201ENSMUST00000196219 675 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm43114-201ENSMUST00000198298 343 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm42578-201ENSMUST00000199960 194 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Mir497-201ENSMUST00000200557 84 ntBASIC2.53□□□□□ -2
Usp28Q5I043 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm7675-201ENSMUST00000208828 686 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm45687-201ENSMUST00000209454 155 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Gm6012-201ENSMUST00000210821 730 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.53□□□□□ -2
Usp28Q5I043 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.53□□□□□ -2
Usp28Q5I043 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.53□□□□□ -2
Usp28Q5I043 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.53□□□□□ -2
Usp28Q5I043 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Usp28Q5I043 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Usp28Q5I043 Gm25728-201ENSMUST00000104525 159 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm14751-201ENSMUST00000117693 222 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm15113-201ENSMUST00000119280 836 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm12891-201ENSMUST00000119358 240 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm12640-201ENSMUST00000120097 310 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm11430-201ENSMUST00000121317 217 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm11438-201ENSMUST00000121582 189 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm2020-201ENSMUST00000145242 579 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm22839-201ENSMUST00000158436 304 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm25194-201ENSMUST00000177987 79 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm19641-201ENSMUST00000188432 417 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm29330-201ENSMUST00000190032 699 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm28098-201ENSMUST00000191361 699 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm37281-201ENSMUST00000192412 439 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm37353-201ENSMUST00000194497 313 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm19252-201ENSMUST00000204705 305 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm45048-201ENSMUST00000207058 429 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
Usp28Q5I043 AC156795.1-201ENSMUST00000214655 414 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm18488-201ENSMUST00000215082 364 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.52□□□□□ -2.01
Usp28Q5I043 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm22740-201ENSMUST00000083439 109 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.52□□□□□ -2.01
Usp28Q5I043 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm25563-201ENSMUST00000104603 74 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm23118-201ENSMUST00000122657 187 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Usp28Q5I043 Gm3104-201ENSMUST00000171004 473 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.51□□□□□ -2.01
Usp28Q5I043 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms