Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm26075-201ENSMUST00000104062 121 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm25420-201ENSMUST00000104216 127 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm25526-201ENSMUST00000104332 132 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm14352-201ENSMUST00000119250 449 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm12276-201ENSMUST00000121709 301 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm14765-201ENSMUST00000121954 326 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm22452-201ENSMUST00000122804 104 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm25559-201ENSMUST00000157182 74 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm24240-201ENSMUST00000157785 135 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm23028-201ENSMUST00000158773 265 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm3104-201ENSMUST00000171004 473 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm22851-201ENSMUST00000178741 94 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm25074-201ENSMUST00000178782 94 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm27582-201ENSMUST00000184084 126 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Mir8106-201ENSMUST00000184520 139 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm8392-201ENSMUST00000185647 835 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm42818-201ENSMUST00000198869 987 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm25203-202ENSMUST00000200458 216 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm44919-201ENSMUST00000208587 1073 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm24147-201ENSMUST00000082763 144 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm25203-201ENSMUST00000082842 215 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm24268-201ENSMUST00000082990 110 ntBASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
Trim40Q3UWA4 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm23609-201ENSMUST00000104542 127 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm14825-201ENSMUST00000113538 701 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm11845-201ENSMUST00000117886 327 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm14841-201ENSMUST00000121067 758 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm8880-201ENSMUST00000121800 454 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm26020-201ENSMUST00000122729 183 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm16354-201ENSMUST00000155376 150 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm25391-201ENSMUST00000157342 134 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm25163-201ENSMUST00000158905 104 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Snord53-201ENSMUST00000175146 78 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Mir6338-201ENSMUST00000183389 109 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm27236-201ENSMUST00000184147 442 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm29216-201ENSMUST00000187117 492 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm7858-201ENSMUST00000190177 622 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm37771-201ENSMUST00000193121 265 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm22572-201ENSMUST00000082985 105 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm23741-201ENSMUST00000097237 171 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trim40Q3UWA4 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Mir542-201ENSMUST00000102186 85 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm15760-201ENSMUST00000119553 283 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm12155-201ENSMUST00000121267 160 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm9225-201ENSMUST00000121921 836 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm25945-201ENSMUST00000122484 135 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm23325-201ENSMUST00000157422 129 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm25427-201ENSMUST00000157605 103 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm23124-201ENSMUST00000157650 107 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm26088-201ENSMUST00000157896 131 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm26041-201ENSMUST00000158148 108 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm25476-201ENSMUST00000175125 185 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Mir6386-201ENSMUST00000183558 104 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm19257-201ENSMUST00000186121 183 ntBASIC2.69□□□□□ -1.98
Trim40Q3UWA4 Gm29104-201ENSMUST00000186304 222 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms