Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm22093-201ENSMUST00000158980 111 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm17893-201ENSMUST00000203017 770 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm45344-201ENSMUST00000211610 341 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm22740-201ENSMUST00000083439 109 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm12513-201ENSMUST00000118617 352 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm14867-201ENSMUST00000120156 866 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm9225-201ENSMUST00000121921 836 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm14651-201ENSMUST00000147192 442 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm16510-201ENSMUST00000153501 249 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm22159-201ENSMUST00000158412 130 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm20415-201ENSMUST00000172877 423 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm24086-201ENSMUST00000175171 98 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm26622-201ENSMUST00000180520 298 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm37987-201ENSMUST00000194999 825 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm19457-201ENSMUST00000200995 448 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm29920-201ENSMUST00000206876 754 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Upf3bQ3ULL6 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm14073-201ENSMUST00000117344 381 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm6954-201ENSMUST00000117416 225 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm13603-201ENSMUST00000119404 83 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm11384-201ENSMUST00000121376 303 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm14694-201ENSMUST00000121856 282 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm24010-201ENSMUST00000157731 282 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Mir6541-201ENSMUST00000183649 110 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm29604-201ENSMUST00000187176 163 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm28169-201ENSMUST00000190342 345 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm20915-201ENSMUST00000191575 663 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm43284-201ENSMUST00000200103 253 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm43901-201ENSMUST00000203247 453 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Gm2544-201ENSMUST00000222702 756 ntBASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Upf3bQ3ULL6 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm13406-201ENSMUST00000121991 256 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm13194-201ENSMUST00000142299 311 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm26348-201ENSMUST00000157528 240 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm25637-201ENSMUST00000157529 107 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm17038-201ENSMUST00000166586 494 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Mir8106-201ENSMUST00000184520 139 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm29263-201ENSMUST00000188718 463 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm28384-201ENSMUST00000189079 463 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 AC147633.1-201ENSMUST00000225134 259 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm24622-201ENSMUST00000082619 162 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm25130-201ENSMUST00000082650 156 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Gm22575-201ENSMUST00000082981 110 ntBASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Upf3bQ3ULL6 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm23754-201ENSMUST00000157576 63 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm17061-201ENSMUST00000163167 499 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm26195-201ENSMUST00000175035 101 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm22131-201ENSMUST00000178415 94 ntBASIC2.28□□□□□ -2.04
Upf3bQ3ULL6 Gm29184-201ENSMUST00000190038 334 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms