Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26129-201ENSMUST00000082719 107 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm23377-201ENSMUST00000082943 126 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26055-201ENSMUST00000083038 107 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm381-201ENSMUST00000117443 2037 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm18360-201ENSMUST00000173327 1524 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm14823-201ENSMUST00000117698 238 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm12025-201ENSMUST00000117768 144 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm2066-201ENSMUST00000118046 389 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm8880-201ENSMUST00000121800 454 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm24499-201ENSMUST00000158446 104 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm24876-201ENSMUST00000158780 92 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm43586-201ENSMUST00000195948 310 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm43115-201ENSMUST00000196244 160 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 AC172751.1-201ENSMUST00000226887 440 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm24045-201ENSMUST00000083113 98 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Mir504-201ENSMUST00000093602 79 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.36□□□□□ -1.71
Rnf180Q3U827 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm26156-201ENSMUST00000116999 123 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm13687-201ENSMUST00000119857 282 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm22036-201ENSMUST00000157279 215 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm24014-201ENSMUST00000157728 157 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm44161-201ENSMUST00000203532 253 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm23932-201ENSMUST00000082914 107 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.35□□□□□ -1.71
Rnf180Q3U827 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf180Q3U827 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm13761-201ENSMUST00000117238 807 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm23887-201ENSMUST00000122683 172 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Mir5099-201ENSMUST00000175257 74 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm23660-201ENSMUST00000178362 79 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm24088-201ENSMUST00000179100 79 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm28408-201ENSMUST00000191557 463 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm19326-201ENSMUST00000219818 326 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Snord21-201ENSMUST00000082519 94 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm25929-201ENSMUST00000082784 107 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm23741-201ENSMUST00000097237 171 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.34□□□□□ -1.71
Rnf180Q3U827 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.34□□□□□ -1.72
Rnf180Q3U827 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Rnf180Q3U827 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms