Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a1Q04857 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm14657-201ENSMUST00000117461 302 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm26276-201ENSMUST00000157099 109 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm25621-201ENSMUST00000157223 114 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm23921-201ENSMUST00000175258 107 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm23215-201ENSMUST00000178153 121 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm26585-201ENSMUST00000180890 630 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Mir6996-201ENSMUST00000183922 61 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm27952-201ENSMUST00000184748 105 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm28314-201ENSMUST00000191276 345 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm37104-201ENSMUST00000193278 196 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm37601-201ENSMUST00000194922 394 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm18429-201ENSMUST00000198707 421 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm18540-201ENSMUST00000204025 526 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.61□□□□□ -1.67
Col6a1Q04857 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a1Q04857 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm12080-201ENSMUST00000119821 1883 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24867-201ENSMUST00000104161 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm14768-201ENSMUST00000122126 678 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24596-201ENSMUST00000122504 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22378-201ENSMUST00000157481 111 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23137-201ENSMUST00000157559 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25211-201ENSMUST00000177553 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24540-201ENSMUST00000177627 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25256-201ENSMUST00000177746 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22822-201ENSMUST00000177941 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Rnu6-201ENSMUST00000178023 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23151-201ENSMUST00000178061 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23402-201ENSMUST00000178130 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25245-201ENSMUST00000178139 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24753-201ENSMUST00000178183 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25829-201ENSMUST00000178275 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22092-201ENSMUST00000178290 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24486-201ENSMUST00000178420 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23217-201ENSMUST00000178482 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26245-201ENSMUST00000178491 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24019-201ENSMUST00000178620 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23610-201ENSMUST00000178659 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23092-201ENSMUST00000178688 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25709-201ENSMUST00000178844 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25547-201ENSMUST00000178877 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25312-201ENSMUST00000178972 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24722-201ENSMUST00000179017 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22969-201ENSMUST00000179018 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25101-201ENSMUST00000179057 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26378-201ENSMUST00000179093 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24873-201ENSMUST00000179101 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23934-201ENSMUST00000179111 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22623-201ENSMUST00000179244 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26243-201ENSMUST00000179260 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25737-201ENSMUST00000179274 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22618-201ENSMUST00000179376 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24182-201ENSMUST00000179419 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24242-201ENSMUST00000179440 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25064-201ENSMUST00000179535 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm26295-201ENSMUST00000179690 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm23712-201ENSMUST00000179713 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22823-201ENSMUST00000179754 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm22360-201ENSMUST00000179775 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24978-201ENSMUST00000179782 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm24967-201ENSMUST00000179791 107 ntBASIC4.6□□□□□ -1.67
Col6a1Q04857 Gm25173-201ENSMUST00000179794 107 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms