Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm24652-201ENSMUST00000178223 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm22629-201ENSMUST00000178272 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm24021-201ENSMUST00000178435 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm22274-201ENSMUST00000178441 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm22050-201ENSMUST00000178442 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm23688-201ENSMUST00000178502 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm23944-201ENSMUST00000178607 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm26283-201ENSMUST00000178625 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm25452-201ENSMUST00000178776 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm23286-201ENSMUST00000178963 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm22640-201ENSMUST00000179035 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm25984-201ENSMUST00000179129 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm25585-201ENSMUST00000179469 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm26374-201ENSMUST00000179737 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm24040-201ENSMUST00000179786 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm25017-201ENSMUST00000179805 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm23618-201ENSMUST00000179912 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm26284-201ENSMUST00000180107 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm24570-201ENSMUST00000180314 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm24654-201ENSMUST00000180315 79 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Mir7022-201ENSMUST00000183749 61 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm29574-201ENSMUST00000186226 696 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm37449-201ENSMUST00000193016 270 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm18658-201ENSMUST00000195558 270 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Mir376a-201ENSMUST00000197584 68 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.4□□□□□ -1.71
Hoxd9P28357 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.4□□□□□ -1.71
Hoxd9P28357 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm25140-201ENSMUST00000083254 140 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.4□□□□□ -1.71
Hoxd9P28357 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.4□□□□□ -1.71
Hoxd9P28357 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Hoxd9P28357 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm26293-201ENSMUST00000104170 84 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm25421-201ENSMUST00000104218 164 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm12328-201ENSMUST00000118611 197 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm15313-201ENSMUST00000119179 282 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm15745-201ENSMUST00000119807 115 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm14922-201ENSMUST00000121131 163 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm22378-201ENSMUST00000157481 111 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm24690-201ENSMUST00000157759 97 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm23644-201ENSMUST00000157856 77 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm25923-201ENSMUST00000158312 138 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm17100-201ENSMUST00000168963 272 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm27387-201ENSMUST00000184583 116 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm27690-201ENSMUST00000184596 126 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm29429-201ENSMUST00000187071 121 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm23925-202ENSMUST00000188429 132 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm8599-201ENSMUST00000193033 457 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm16419-201ENSMUST00000221057 625 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm26457-201ENSMUST00000082678 78 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.39□□□□□ -1.71
Hoxd9P28357 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.39□□□□□ -1.71
Hoxd9P28357 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Hoxd9P28357 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Hoxd9P28357 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd9P28357 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Hoxd9P28357 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Hoxd9P28357 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Mir147-201ENSMUST00000102354 79 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm12261-201ENSMUST00000117499 645 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm15497-201ENSMUST00000119137 551 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm12237-201ENSMUST00000120158 470 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm12617-201ENSMUST00000121268 381 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC4.38□□□□□ -1.71
Hoxd9P28357 Mir1966-201ENSMUST00000158807 108 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm5258-201ENSMUST00000165437 327 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm16404-201ENSMUST00000177739 468 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm6660-201ENSMUST00000179149 468 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm14598-201ENSMUST00000180109 468 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm14625-201ENSMUST00000180231 468 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm19427-201ENSMUST00000183619 208 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm27760-201ENSMUST00000185048 114 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC4.38□□□□□ -1.71
Hoxd9P28357 Ighv15-1-201ENSMUST00000194450 276 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm8820-201ENSMUST00000204077 571 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Gm22294-201ENSMUST00000083308 104 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Mir384-201ENSMUST00000083565 88 ntBASIC4.38□□□□□ -1.71
Hoxd9P28357 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms