Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.1□□□□□ -2.07
Sdc1P18828 Gm22380-201ENSMUST00000157479 95 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm24505-201ENSMUST00000157682 126 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm25365-201ENSMUST00000158852 121 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm16232-201ENSMUST00000162856 167 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm17377-201ENSMUST00000165184 207 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm17054-201ENSMUST00000169811 259 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Mir3964-201ENSMUST00000174898 74 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm4076-201ENSMUST00000179230 965 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm43286-201ENSMUST00000197420 424 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm43171-201ENSMUST00000199882 291 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm45101-201ENSMUST00000208327 232 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 AC155923.1-201ENSMUST00000215676 356 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.1□□□□□ -2.07
Sdc1P18828 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Sdc1P18828 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Sdc1P18828 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Sdc1P18828 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Sdc1P18828 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Sdc1P18828 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm25727-201ENSMUST00000104522 131 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm12096-201ENSMUST00000121149 829 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.09□□□□□ -2.07
Sdc1P18828 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.09□□□□□ -2.07
Sdc1P18828 Gm24908-201ENSMUST00000157294 127 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm23326-201ENSMUST00000157419 105 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm23642-201ENSMUST00000157858 258 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm22483-201ENSMUST00000157986 274 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm15900-201ENSMUST00000161584 342 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm8292-201ENSMUST00000162574 396 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Sdc1P18828 Gm27773-201ENSMUST00000184087 78 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm37029-201ENSMUST00000195773 239 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm43550-201ENSMUST00000200597 303 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm18691-201ENSMUST00000203593 872 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm44084-201ENSMUST00000203947 409 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm45678-201ENSMUST00000210509 295 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm45420-201ENSMUST00000211243 425 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.09□□□□□ -2.07
Sdc1P18828 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.09□□□□□ -2.07
Sdc1P18828 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC2.09□□□□□ -2.07
Sdc1P18828 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Sdc1P18828 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.09□□□□□ -2.07
Sdc1P18828 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Sdc1P18828 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Sdc1P18828 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Sdc1P18828 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Sdc1P18828 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.09□□□□□ -2.08
Sdc1P18828 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.08
Sdc1P18828 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm25563-201ENSMUST00000104603 74 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm12878-201ENSMUST00000118744 332 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm11943-201ENSMUST00000119473 327 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 DQ267100-201ENSMUST00000122600 72 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm14389-201ENSMUST00000140453 241 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm24716-201ENSMUST00000157524 104 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm2966-201ENSMUST00000166052 481 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20794-201ENSMUST00000177626 628 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm28356-202ENSMUST00000187566 858 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20885-201ENSMUST00000190192 654 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Sdc1P18828 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm33571-201ENSMUST00000193271 657 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm36866-201ENSMUST00000193343 657 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm36047-201ENSMUST00000193659 657 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Trbv6-201ENSMUST00000193743 276 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20857-201ENSMUST00000194766 657 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm20858-201ENSMUST00000195459 657 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm42805-201ENSMUST00000196158 276 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Sdc1P18828 Mir3069-201ENSMUST00000198802 65 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.08□□□□□ -2.08
Sdc1P18828 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm9762-201ENSMUST00000036976 444 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Sdc1P18828 Gm23925-201ENSMUST00000082471 132 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm26129-201ENSMUST00000082719 107 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.08□□□□□ -2.08
Sdc1P18828 Gm24533-201ENSMUST00000083138 196 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms