Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12697-201ENSMUST00000118008 667 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm13876-201ENSMUST00000118451 261 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm12016-201ENSMUST00000119079 681 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm24691-201ENSMUST00000157762 140 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm21726-201ENSMUST00000179654 392 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm27761-201ENSMUST00000184091 131 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm37557-201ENSMUST00000191640 139 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm43402-201ENSMUST00000197159 159 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Cdx1P18111 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.18□□□□□ -2.06
Cdx1P18111 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Cdx1P18111 Gm23733-201ENSMUST00000083750 106 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.18□□□□□ -2.06
Cdx1P18111 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Cdx1P18111 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Cdx1P18111 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Cdx1P18111 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cdx1P18111 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Cdx1P18111 Gm14931-201ENSMUST00000111079 253 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm11460-201ENSMUST00000118200 361 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm13555-201ENSMUST00000121668 319 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm23980-201ENSMUST00000157135 158 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.17□□□□□ -2.06
Cdx1P18111 Gm8292-201ENSMUST00000162574 396 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm23268-201ENSMUST00000175494 78 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Mir5123-201ENSMUST00000177794 83 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm21827-201ENSMUST00000178247 423 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.17□□□□□ -2.06
Cdx1P18111 Gm37743-201ENSMUST00000194645 376 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Cdx1P18111 Gm43955-201ENSMUST00000204332 142 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm18488-201ENSMUST00000215082 364 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.17□□□□□ -2.06
Cdx1P18111 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Cdx1P18111 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.17□□□□□ -2.06
Cdx1P18111 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Cdx1P18111 Gm23727-201ENSMUST00000083352 164 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Cdx1P18111 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Cdx1P18111 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Cdx1P18111 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.17□□□□□ -2.06
Cdx1P18111 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Cdx1P18111 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Cdx1P18111 Mir883a-201ENSMUST00000104824 76 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm20656-201ENSMUST00000176925 518 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm27220-201ENSMUST00000183453 262 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Mir6363-201ENSMUST00000184880 114 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.16□□□□□ -2.06
Cdx1P18111 Gm20058-201ENSMUST00000186939 284 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.16□□□□□ -2.06
Cdx1P18111 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm43550-201ENSMUST00000200597 303 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Cdx1P18111 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Cdx1P18111 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Cdx1P18111 Gm16261-201ENSMUST00000096813 205 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Cdx1P18111 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.16□□□□□ -2.06
Cdx1P18111 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Cdx1P18111 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.16□□□□□ -2.06
Cdx1P18111 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.15□□□□□ -2.06
Cdx1P18111 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Cdx1P18111 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Mir499-201ENSMUST00000102357 79 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm13331-201ENSMUST00000117500 448 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm13510-201ENSMUST00000118659 429 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm12071-201ENSMUST00000121968 469 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm12045-201ENSMUST00000122122 573 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.15□□□□□ -2.07
Cdx1P18111 Gm22651-201ENSMUST00000157872 94 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm8207-201ENSMUST00000171204 502 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm27379-201ENSMUST00000183730 123 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm20915-201ENSMUST00000191575 663 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.15□□□□□ -2.07
Cdx1P18111 Gm37455-201ENSMUST00000191993 529 ntBASIC2.15□□□□□ -2.07
Cdx1P18111 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.15□□□□□ -2.07
Cdx1P18111 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.15□□□□□ -2.07
Cdx1P18111 Gm43286-201ENSMUST00000197420 424 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms