Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm21744-201ENSMUST00000178403 662 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Lire1P11260 Gm21171-201ENSMUST00000180048 673 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Mir6382-201ENSMUST00000184055 110 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm29413-201ENSMUST00000186019 880 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Lire1P11260 Gm28700-201ENSMUST00000187614 579 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm28113-201ENSMUST00000188280 229 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm29639-201ENSMUST00000188375 580 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm28843-201ENSMUST00000189198 678 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm29546-201ENSMUST00000191171 678 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC2.88□□□□□ -1.95
Lire1P11260 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.88□□□□□ -1.95
Lire1P11260 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm43899-201ENSMUST00000203675 246 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm44961-201ENSMUST00000207450 196 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Gm24044-201ENSMUST00000083107 156 ntBASIC2.88□□□□□ -1.95
Lire1P11260 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.88□□□□□ -1.95
Lire1P11260 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Lire1P11260 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Lire1P11260 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Lire1P11260 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Lire1P11260 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Lire1P11260 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Lire1P11260 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Lire1P11260 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Lire1P11260 Gm15110-201ENSMUST00000117545 881 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm11845-201ENSMUST00000117886 327 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm15167-201ENSMUST00000121997 187 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm23033-201ENSMUST00000157996 134 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm25365-201ENSMUST00000158852 121 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Mir3965-201ENSMUST00000175570 69 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm24713-201ENSMUST00000178850 107 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm25448-201ENSMUST00000180065 107 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Mir6916-201ENSMUST00000184514 63 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm43171-201ENSMUST00000199882 291 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm44459-201ENSMUST00000203926 160 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.87□□□□□ -1.95
Lire1P11260 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.87□□□□□ -1.95
Lire1P11260 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Lire1P11260 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Lire1P11260 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Lire1P11260 Gm25131-201ENSMUST00000082653 151 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.87□□□□□ -1.95
Lire1P11260 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Lire1P11260 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Lire1P11260 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm22496-201ENSMUST00000104493 88 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm14359-201ENSMUST00000118883 424 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm14593-201ENSMUST00000119948 294 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm14360-201ENSMUST00000120670 393 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm9498-201ENSMUST00000140849 291 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.86□□□□□ -1.95
Lire1P11260 Gm16111-201ENSMUST00000162128 285 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Lire1P11260 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Mir3964-201ENSMUST00000174898 74 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm25175-201ENSMUST00000178712 79 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm28951-201ENSMUST00000190742 313 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.86□□□□□ -1.95
Lire1P11260 Gm32033-201ENSMUST00000193483 339 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm42647-201ENSMUST00000195939 459 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.86□□□□□ -1.95
Lire1P11260 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm8940-201ENSMUST00000212585 219 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.86□□□□□ -1.95
Lire1P11260 Gm7065-201ENSMUST00000222150 474 ntBASIC2.86□□□□□ -1.95
Lire1P11260 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.86□□□□□ -1.95
Lire1P11260 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Lire1P11260 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Lire1P11260 Gm22249-201ENSMUST00000082485 136 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm23136-201ENSMUST00000083425 99 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Gm23847-201ENSMUST00000083829 110 ntBASIC2.86□□□□□ -1.95
Lire1P11260 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.86□□□□□ -1.95
Lire1P11260 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Lire1P11260 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
Lire1P11260 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Lire1P11260 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Lire1P11260 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Lire1P11260 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Lire1P11260 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
Lire1P11260 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Lire1P11260 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm12819-201ENSMUST00000122223 629 ntBASIC2.85□□□□□ -1.95
Lire1P11260 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm6265-201ENSMUST00000149263 231 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm22722-201ENSMUST00000157467 132 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm22833-201ENSMUST00000158292 132 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.85□□□□□ -1.95
Lire1P11260 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm23402-201ENSMUST00000178130 107 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.85□□□□□ -1.95
Lire1P11260 Gm27608-201ENSMUST00000184822 162 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm28282-201ENSMUST00000186072 186 ntBASIC2.85□□□□□ -1.95
Lire1P11260 Gm28534-201ENSMUST00000187744 676 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms