Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm5958-201ENSMUST00000147698 297 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Gm23083-201ENSMUST00000157851 116 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col1a1P11087 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col1a1P11087 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Gm6113-201ENSMUST00000180319 639 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Gm43765-201ENSMUST00000196303 893 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Gm43723-201ENSMUST00000196886 189 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Gm45048-201ENSMUST00000207058 429 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.69□□□□□ -2.14
Col1a1P11087 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Col1a1P11087 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.69□□□□□ -2.14
Col1a1P11087 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
Col1a1P11087 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col1a1P11087 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Col1a1P11087 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col1a1P11087 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col1a1P11087 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC1.68□□□□□ -2.14
Col1a1P11087 Snord71-201ENSMUST00000104361 85 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col1a1P11087 Gm14008-201ENSMUST00000120483 274 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.68□□□□□ -2.14
Col1a1P11087 Gm24546-201ENSMUST00000158652 102 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Gm25971-201ENSMUST00000158953 286 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col1a1P11087 Mir6351-201ENSMUST00000183826 99 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Gm19641-201ENSMUST00000188432 417 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Gm9068-201ENSMUST00000217393 455 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Gm9472-201ENSMUST00000221625 526 ntBASIC1.68□□□□□ -2.14
Col1a1P11087 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Col1a1P11087 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Col1a1P11087 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
Col1a1P11087 Mir19b-1-201ENSMUST00000102301 87 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm15488-201ENSMUST00000121682 670 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm25365-201ENSMUST00000158852 121 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm23636-201ENSMUST00000175070 95 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm29429-201ENSMUST00000187071 121 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.67□□□□□ -2.14
Col1a1P11087 Gm20915-201ENSMUST00000191575 663 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm37119-201ENSMUST00000195691 389 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm44478-201ENSMUST00000204875 114 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.67□□□□□ -2.14
Col1a1P11087 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC1.67□□□□□ -2.14
Col1a1P11087 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 Gm25005-201ENSMUST00000083812 156 ntBASIC1.67□□□□□ -2.14
Col1a1P11087 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Gm2288-201ENSMUST00000118560 638 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Gm27921-201ENSMUST00000183968 108 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Mir7063-201ENSMUST00000184158 91 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Gm8676-201ENSMUST00000184206 637 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.66□□□□□ -2.14
Col1a1P11087 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.66□□□□□ -2.14
Col1a1P11087 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col1a1P11087 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col1a1P11087 Gm22866-201ENSMUST00000083947 177 ntBASIC1.66□□□□□ -2.14
Col1a1P11087 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col1a1P11087 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.65□□□□□ -2.15
Col1a1P11087 Gm13457-201ENSMUST00000117885 267 ntBASIC1.65□□□□□ -2.15
Col1a1P11087 Gm22929-201ENSMUST00000175517 107 ntBASIC1.65□□□□□ -2.15
Col1a1P11087 Gm37676-201ENSMUST00000195496 507 ntBASIC1.65□□□□□ -2.15
Col1a1P11087 Mir7217-201ENSMUST00000200304 62 ntBASIC1.65□□□□□ -2.15
Col1a1P11087 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.65□□□□□ -2.15
Col1a1P11087 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.65□□□□□ -2.15
Col1a1P11087 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.65□□□□□ -2.15
Col1a1P11087 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Col1a1P11087 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC1.64□□□□□ -2.15
Col1a1P11087 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Col1a1P11087 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Col1a1P11087 Gm13355-201ENSMUST00000117996 317 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Gm11693-201ENSMUST00000119625 565 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Gm24630-201ENSMUST00000122768 106 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Gm16147-201ENSMUST00000162143 373 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Col1a1P11087 Gm28058-201ENSMUST00000186421 264 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Col1a1P11087 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.64□□□□□ -2.15
Col1a1P11087 Gm43070-201ENSMUST00000196938 415 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.64□□□□□ -2.15
Col1a1P11087 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.64□□□□□ -2.15
Col1a1P11087 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Col1a1P11087 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.64□□□□□ -2.15
Col1a1P11087 Gm14786-201ENSMUST00000117127 944 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm24813-201ENSMUST00000175310 84 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm23190-201ENSMUST00000180307 64 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm6060-201ENSMUST00000188671 251 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm28552-201ENSMUST00000190725 388 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.63□□□□□ -2.15
Col1a1P11087 AC157772.2-201ENSMUST00000228202 259 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm22507-201ENSMUST00000082773 160 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Gm25755-201ENSMUST00000083396 107 ntBASIC1.63□□□□□ -2.15
Col1a1P11087 Mir196b-201ENSMUST00000083509 85 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms