Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Hoxd3P09027 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm43696-201ENSMUST00000199385 6071 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm22373-201ENSMUST00000104584 89 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm25543-201ENSMUST00000122678 312 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm23586-201ENSMUST00000157657 123 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm26171-201ENSMUST00000158422 131 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Mir6338-201ENSMUST00000183389 109 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Mir7056-201ENSMUST00000183776 59 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm27492-201ENSMUST00000185194 187 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm2497-201ENSMUST00000189539 601 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm17966-201ENSMUST00000193453 594 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm44052-201ENSMUST00000203382 396 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm17999-201ENSMUST00000211568 542 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm25136-201ENSMUST00000083253 115 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm23453-201ENSMUST00000083326 106 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Mir17-201ENSMUST00000083574 84 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm23796-201ENSMUST00000084011 160 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm24164-201ENSMUST00000093663 104 ntBASIC3.92□□□□□ -1.78
Hoxd3P09027 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.92□□□□□ -1.78
Hoxd3P09027 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC3.92□□□□□ -1.78
Hoxd3P09027 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm43462-201ENSMUST00000200265 3648 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm22148-201ENSMUST00000104445 107 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Mir1298-201ENSMUST00000116681 98 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm12261-201ENSMUST00000117499 645 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm13797-201ENSMUST00000121792 120 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm22320-201ENSMUST00000157149 312 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm10087-201ENSMUST00000167650 330 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm27688-201ENSMUST00000183634 91 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.91□□□□□ -1.78
Hoxd3P09027 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd3P09027 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd3P09027 Gm37357-201ENSMUST00000192386 3123 ntBASIC3.9□□□□□ -1.78
Hoxd3P09027 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hoxd3P09027 Gm37558-201ENSMUST00000193684 2983 ntBASIC3.9□□□□□ -1.78
Hoxd3P09027 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hoxd3P09027 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.9□□□□□ -1.78
Hoxd3P09027 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC3.9□□□□□ -1.78
Hoxd3P09027 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hoxd3P09027 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hoxd3P09027 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Hoxd3P09027 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Hoxd3P09027 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Hoxd3P09027 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm15936-201ENSMUST00000118706 460 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm15357-201ENSMUST00000119160 285 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm11790-201ENSMUST00000119569 455 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm12379-201ENSMUST00000119607 391 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm13801-201ENSMUST00000120750 160 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm22453-201ENSMUST00000122801 318 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Mir1942-201ENSMUST00000157274 63 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm24916-201ENSMUST00000157287 79 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm26153-201ENSMUST00000157433 127 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Mir1946b-201ENSMUST00000157853 133 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm23513-201ENSMUST00000158181 133 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm23115-201ENSMUST00000158480 108 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm26200-201ENSMUST00000180273 79 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm19503-201ENSMUST00000187109 241 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.9□□□□□ -1.79
Hoxd3P09027 Gm37070-201ENSMUST00000193272 460 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 Supt4b-201ENSMUST00000214434 351 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.9□□□□□ -1.79
Hoxd3P09027 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 115.8 ms