Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.38□□□□□ -1.87
Col3a1P08121 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.38□□□□□ -1.87
Col3a1P08121 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC3.38□□□□□ -1.87
Col3a1P08121 Gm22675-201ENSMUST00000158430 104 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col3a1P08121 Gm26983-201ENSMUST00000182051 388 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Col3a1P08121 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.38□□□□□ -1.87
Col3a1P08121 Gm44468-201ENSMUST00000199516 105 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Gm19140-201ENSMUST00000209790 421 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Gm24319-201ENSMUST00000083389 107 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Gm26176-201ENSMUST00000083795 105 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col3a1P08121 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.38□□□□□ -1.87
Col3a1P08121 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col3a1P08121 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col3a1P08121 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col3a1P08121 Gm22656-201ENSMUST00000104199 171 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm26247-201ENSMUST00000116702 91 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm24275-201ENSMUST00000116780 146 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm14927-201ENSMUST00000120283 454 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm2768-201ENSMUST00000121062 250 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm22479-201ENSMUST00000122566 81 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm24737-201ENSMUST00000158861 100 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm24875-201ENSMUST00000158888 104 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Col3a1P08121 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm7094-201ENSMUST00000178379 366 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm26585-201ENSMUST00000180890 630 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Mir6481-201ENSMUST00000184617 110 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm28058-201ENSMUST00000186421 264 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm43669-201ENSMUST00000198229 436 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm44818-201ENSMUST00000206608 358 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm4528-201ENSMUST00000207905 551 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm44959-201ENSMUST00000209127 231 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col3a1P08121 Gm2436-201ENSMUST00000219562 774 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.37□□□□□ -1.87
Col3a1P08121 Gm7422-201ENSMUST00000220115 640 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col3a1P08121 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col3a1P08121 Gm25859-201ENSMUST00000083710 91 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Gm10343-201ENSMUST00000096279 348 ntBASIC3.37□□□□□ -1.87
Col3a1P08121 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.36□□□□□ -1.87
Col3a1P08121 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Col3a1P08121 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm14142-201ENSMUST00000117833 296 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm6923-201ENSMUST00000118343 406 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm11438-201ENSMUST00000121582 189 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm14362-201ENSMUST00000121679 273 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm14821-201ENSMUST00000121975 435 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Defa-ps12-201ENSMUST00000122353 193 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm15254-201ENSMUST00000149567 273 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm25902-201ENSMUST00000158493 318 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm24922-201ENSMUST00000158511 102 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm22500-201ENSMUST00000158982 99 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm15974-201ENSMUST00000159103 531 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm20794-201ENSMUST00000177626 628 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm17929-201ENSMUST00000186851 627 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm44923-201ENSMUST00000206673 85 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Gm25141-201ENSMUST00000083177 107 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col3a1P08121 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.36□□□□□ -1.87
Col3a1P08121 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col3a1P08121 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Col3a1P08121 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col3a1P08121 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 Gm14448-201ENSMUST00000116383 210 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm9059-201ENSMUST00000118319 183 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm12803-201ENSMUST00000118907 821 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Mup-ps21-201ENSMUST00000119998 448 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms