Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm20172-201ENSMUST00000193138 1551 ntBASIC1.91□□□□□ -2.1
CfdP03953 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm12825-201ENSMUST00000120249 563 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm12045-201ENSMUST00000122122 573 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm12443-201ENSMUST00000122308 323 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm2020-201ENSMUST00000145242 579 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm22236-201ENSMUST00000157093 106 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm23469-201ENSMUST00000157131 104 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm25283-201ENSMUST00000157272 77 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm26173-201ENSMUST00000158416 136 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm16326-201ENSMUST00000162843 414 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm2855-201ENSMUST00000166765 456 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
CfdP03953 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CfdP03953 Gm23268-201ENSMUST00000175494 78 ntBASIC1.91□□□□□ -2.1
CfdP03953 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm25451-201ENSMUST00000177832 121 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CfdP03953 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CfdP03953 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.91□□□□□ -2.1
CfdP03953 Gm27470-201ENSMUST00000184070 210 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm28666-201ENSMUST00000186649 274 ntBASIC1.91□□□□□ -2.1
CfdP03953 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CfdP03953 Gm2719-201ENSMUST00000191929 444 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm8023-201ENSMUST00000195298 903 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm19147-201ENSMUST00000199622 652 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm44399-201ENSMUST00000205043 226 ntBASIC1.91□□□□□ -2.1
CfdP03953 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm18160-201ENSMUST00000214279 827 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm46994-201ENSMUST00000221523 219 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm5955-201ENSMUST00000222712 219 ntBASIC1.91□□□□□ -2.1
CfdP03953 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.91□□□□□ -2.1
CfdP03953 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.91□□□□□ -2.1
CfdP03953 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.91□□□□□ -2.1
CfdP03953 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.91□□□□□ -2.1
CfdP03953 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CfdP03953 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CfdP03953 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm22806-201ENSMUST00000082738 136 ntBASIC1.91□□□□□ -2.1
CfdP03953 Gm24044-201ENSMUST00000083107 156 ntBASIC1.91□□□□□ -2.1
CfdP03953 Snora69-201ENSMUST00000083708 131 ntBASIC1.91□□□□□ -2.1
CfdP03953 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CfdP03953 Gm25414-201ENSMUST00000101814 107 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l9-201ENSMUST00000101891 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm26504-201ENSMUST00000102033 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm22494-201ENSMUST00000104495 128 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm25728-201ENSMUST00000104525 159 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm15094-201ENSMUST00000118394 1131 ntBASIC1.9□□□□□ -2.11
CfdP03953 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm14867-201ENSMUST00000120156 866 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm6587-201ENSMUST00000120219 613 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm14101-201ENSMUST00000121502 473 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm11438-201ENSMUST00000121582 189 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm25391-201ENSMUST00000157342 134 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm24532-201ENSMUST00000157951 286 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm24769-201ENSMUST00000158506 129 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC1.9□□□□□ -2.11
CfdP03953 Mir3964-201ENSMUST00000174898 74 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm25476-201ENSMUST00000175125 185 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm18417-201ENSMUST00000176564 648 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm26502-201ENSMUST00000177732 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l13-201ENSMUST00000177737 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm25350-201ENSMUST00000177849 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l15-201ENSMUST00000177940 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm23446-201ENSMUST00000177977 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l4-201ENSMUST00000177982 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm26201-201ENSMUST00000178047 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm24711-201ENSMUST00000178062 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm24609-201ENSMUST00000178166 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm23265-201ENSMUST00000178321 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm22812-201ENSMUST00000178329 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l3-201ENSMUST00000178370 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm26246-201ENSMUST00000178388 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm25155-201ENSMUST00000178450 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm24760-201ENSMUST00000178530 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm22285-201ENSMUST00000178576 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm22417-201ENSMUST00000178656 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l2-201ENSMUST00000178675 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm26270-201ENSMUST00000178690 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l16-201ENSMUST00000178777 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm23313-201ENSMUST00000178931 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l17-201ENSMUST00000178936 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm23089-201ENSMUST00000178947 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l10-201ENSMUST00000179053 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm24153-201ENSMUST00000179280 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm25597-201ENSMUST00000179388 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l1-201ENSMUST00000179518 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm25816-201ENSMUST00000179764 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CfdP03953 Snord116l8-201ENSMUST00000179889 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l7-201ENSMUST00000179895 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l5-201ENSMUST00000179927 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l6-201ENSMUST00000179955 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm26188-201ENSMUST00000179963 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm26433-201ENSMUST00000180227 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Snord116l11-201ENSMUST00000180312 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Gm22128-201ENSMUST00000180346 94 ntBASIC1.9□□□□□ -2.11
CfdP03953 Mir6382-201ENSMUST00000184055 110 ntBASIC1.9□□□□□ -2.11
CfdP03953 Mir6383-201ENSMUST00000184545 116 ntBASIC1.9□□□□□ -2.11
CfdP03953 Mir6975-201ENSMUST00000184879 61 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms