Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm7753-201ENSMUST00000221007 867 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm7065-201ENSMUST00000222150 474 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Gm25126-201ENSMUST00000083343 102 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.56□□□□□ -2.16
Hmgb3O54879 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
Hmgb3O54879 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm26015-201ENSMUST00000104402 125 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm22497-201ENSMUST00000104499 131 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm649-201ENSMUST00000117284 1054 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm15497-201ENSMUST00000119137 551 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm12872-201ENSMUST00000121835 320 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm14848-201ENSMUST00000121850 467 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm26275-201ENSMUST00000157101 268 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm25658-201ENSMUST00000158472 128 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm28282-201ENSMUST00000186072 186 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm19224-201ENSMUST00000190477 793 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm7946-201ENSMUST00000203326 958 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm43978-201ENSMUST00000203491 451 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm45438-201ENSMUST00000210242 564 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm20948-201ENSMUST00000211091 449 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.55□□□□□ -2.16
Hmgb3O54879 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.55□□□□□ -2.16
Hmgb3O54879 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Hmgb3O54879 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.55□□□□□ -2.16
Hmgb3O54879 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Hmgb3O54879 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Hmgb3O54879 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Mir301-201ENSMUST00000083655 86 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.55□□□□□ -2.16
Hmgb3O54879 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Hmgb3O54879 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm14709-201ENSMUST00000121225 304 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm9001-201ENSMUST00000121642 399 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC1.54□□□□□ -2.16
Hmgb3O54879 U6.1-201ENSMUST00000157443 101 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm5277-201ENSMUST00000164923 556 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20794-201ENSMUST00000177626 628 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm23933-201ENSMUST00000178405 79 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm22367-201ENSMUST00000178930 132 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm28356-202ENSMUST00000187566 858 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm29641-201ENSMUST00000188955 259 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20885-201ENSMUST00000190192 654 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm33571-201ENSMUST00000193271 657 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm36866-201ENSMUST00000193343 657 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm36047-201ENSMUST00000193659 657 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20857-201ENSMUST00000194766 657 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm20858-201ENSMUST00000195459 657 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm30638-201ENSMUST00000195570 656 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm42665-201ENSMUST00000202100 586 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm18268-201ENSMUST00000208445 943 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm6109-201ENSMUST00000223297 348 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm10038-201ENSMUST00000077233 441 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Gm23058-201ENSMUST00000093703 107 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Hmgb3O54879 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.54□□□□□ -2.16
Hmgb3O54879 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.54□□□□□ -2.16
Hmgb3O54879 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Hmgb3O54879 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Hmgb3O54879 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm22782-201ENSMUST00000104082 132 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm15215-201ENSMUST00000117773 489 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm13454-201ENSMUST00000118166 483 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm15223-201ENSMUST00000120989 826 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 186.4 ms