Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm13424-201ENSMUST00000122301 354 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm8200-201ENSMUST00000122390 222 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm22482-201ENSMUST00000122563 359 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm6265-201ENSMUST00000149263 231 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm24481-201ENSMUST00000157210 102 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm23585-201ENSMUST00000157656 102 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm21816-201ENSMUST00000179255 360 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm21960-201ENSMUST00000181924 452 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Mir6335-201ENSMUST00000184081 98 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm27952-201ENSMUST00000184748 105 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm28148-201ENSMUST00000186924 697 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm28500-201ENSMUST00000190286 151 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm9379-201ENSMUST00000196790 646 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm19096-201ENSMUST00000209705 766 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Gm42528-201ENSMUST00000200697 3418 ntBASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
Pcdh1F7BJK1 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm19428-201ENSMUST00000220512 1995 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm42681-201ENSMUST00000197999 1611 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm7853-201ENSMUST00000100708 478 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm16128-201ENSMUST00000117855 626 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm15120-201ENSMUST00000120602 301 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm11384-201ENSMUST00000121376 303 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm24630-201ENSMUST00000122768 106 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm26187-201ENSMUST00000157693 101 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm22156-201ENSMUST00000158409 141 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm22433-201ENSMUST00000158550 142 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm23921-201ENSMUST00000175258 107 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm22286-201ENSMUST00000179708 107 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm29140-201ENSMUST00000190187 476 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm9402-201ENSMUST00000196849 388 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm5876-201ENSMUST00000203735 243 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm44977-201ENSMUST00000205283 420 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm44513-201ENSMUST00000206811 439 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm45651-201ENSMUST00000210857 335 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm9616-201ENSMUST00000221154 781 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 LOC667541-201ENSMUST00000223408 278 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm18441-201ENSMUST00000223539 617 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm24856-201ENSMUST00000082809 107 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm22997-201ENSMUST00000082845 107 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm25258-201ENSMUST00000083049 107 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm25411-201ENSMUST00000083760 151 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm23041-201ENSMUST00000083868 106 ntBASIC3.82□□□□□ -1.8
Pcdh1F7BJK1 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Mir881-201ENSMUST00000104844 78 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm14537-201ENSMUST00000117464 599 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm13478-201ENSMUST00000118312 413 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm13692-201ENSMUST00000120774 371 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm22177-201ENSMUST00000175002 158 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm27477-201ENSMUST00000184649 143 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm5372-201ENSMUST00000187540 409 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm45499-201ENSMUST00000211656 280 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Pcdh1F7BJK1 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Pcdh1F7BJK1 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms