Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Col6a3E9PWQ3 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm12304-201ENSMUST00000120312 385 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm14770-201ENSMUST00000122197 312 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm22843-201ENSMUST00000157710 134 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm14736-201ENSMUST00000121470 336 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm23752-201ENSMUST00000157584 115 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm28802-201ENSMUST00000188624 944 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm36994-201ENSMUST00000192941 492 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm43316-201ENSMUST00000197252 1295 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gm25005-201ENSMUST00000083812 156 ntBASIC1.18□□□□□ -2.22
Col6a3E9PWQ3 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm25992-201ENSMUST00000102437 109 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Snord65-201ENSMUST00000104269 72 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm17065-201ENSMUST00000165245 239 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm28862-201ENSMUST00000188246 163 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm22217-201ENSMUST00000157556 313 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm23385-201ENSMUST00000158592 295 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm5322-201ENSMUST00000206142 699 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.17□□□□□ -2.22
Col6a3E9PWQ3 Gm27161-201ENSMUST00000183960 562 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm3724-201ENSMUST00000197957 349 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 CT025525.1-201ENSMUST00000226325 1054 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 AC123658.1-201ENSMUST00000228364 867 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm12294-201ENSMUST00000119723 490 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm13419-201ENSMUST00000121711 271 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm13868-201ENSMUST00000122411 294 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm24323-201ENSMUST00000175342 77 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm10088-201ENSMUST00000074116 423 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm22353-201ENSMUST00000083918 136 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm15143-201ENSMUST00000178180 714 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm18296-201ENSMUST00000192475 783 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm44446-201ENSMUST00000204864 255 ntBASIC1.16□□□□□ -2.22
Col6a3E9PWQ3 Gm9009-201ENSMUST00000117321 326 ntBASIC1.15□□□□□ -2.22
Col6a3E9PWQ3 Gm27233-201ENSMUST00000184030 307 ntBASIC1.15□□□□□ -2.22
Col6a3E9PWQ3 Gm44989-201ENSMUST00000204749 217 ntBASIC1.15□□□□□ -2.22
Col6a3E9PWQ3 Gm45688-201ENSMUST00000210002 101 ntBASIC1.15□□□□□ -2.22
Col6a3E9PWQ3 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.15□□□□□ -2.22
Col6a3E9PWQ3 Mir30d-201ENSMUST00000083503 82 ntBASIC1.15□□□□□ -2.22
Col6a3E9PWQ3 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm14988-201ENSMUST00000117224 1548 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm15108-201ENSMUST00000116160 803 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm13614-201ENSMUST00000117306 503 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm15111-201ENSMUST00000122142 878 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm15281-201ENSMUST00000125181 351 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm15275-201ENSMUST00000154752 347 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Gm44288-201ENSMUST00000205061 2795 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.15□□□□□ -2.23
Col6a3E9PWQ3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Gm43954-201ENSMUST00000204634 544 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 AC073947.1-201ENSMUST00000216991 649 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Gm11572-201ENSMUST00000119164 120 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Gm25108-201ENSMUST00000122473 78 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Gm22074-201ENSMUST00000158595 113 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Gm22418-201ENSMUST00000180326 107 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Gm17937-201ENSMUST00000197908 742 ntBASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col6a3E9PWQ3 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm15951-201ENSMUST00000118377 400 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm24476-201ENSMUST00000157437 131 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm15659-201ENSMUST00000118881 341 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm23813-201ENSMUST00000175153 77 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm34015-201ENSMUST00000194908 451 ntBASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.13□□□□□ -2.23
Col6a3E9PWQ3 Gm37993-201ENSMUST00000195301 988 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms