Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Gm45173-201ENSMUST00000206819 305 ntBASIC0.84□□□□□ -2.27
Trav4d-3A0A075B625 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
Trav4d-3A0A075B625 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Trav4d-3A0A075B625 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm11845-201ENSMUST00000117886 327 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm13085-201ENSMUST00000118356 171 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm24777-201ENSMUST00000157644 107 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm23865-201ENSMUST00000157723 97 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm22485-201ENSMUST00000157990 109 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm22316-201ENSMUST00000158012 216 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Mir6376-201ENSMUST00000185149 131 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm18433-201ENSMUST00000192747 197 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm42465-201ENSMUST00000197036 492 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm23407-201ENSMUST00000082538 91 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm23245-201ENSMUST00000083370 135 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm23247-201ENSMUST00000083373 107 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 Gm37661-201ENSMUST00000191863 1550 ntBASIC0.83□□□□□ -2.28
Trav4d-3A0A075B625 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm42701-201ENSMUST00000196117 1657 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm24982-201ENSMUST00000104456 132 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm12191-201ENSMUST00000118307 348 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm12156-201ENSMUST00000119188 554 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Cox20-ps-201ENSMUST00000119872 353 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm14845-201ENSMUST00000121259 306 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm22537-201ENSMUST00000158172 199 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm25971-201ENSMUST00000158953 286 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Ear-ps3-201ENSMUST00000168308 445 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Mir7k-201ENSMUST00000184115 110 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Mir6352-201ENSMUST00000184495 116 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm18982-201ENSMUST00000198118 529 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm42474-201ENSMUST00000201073 505 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm45268-201ENSMUST00000210046 370 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm45689-201ENSMUST00000210522 133 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 CT571268.1-201ENSMUST00000222320 407 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 CT025579.1-201ENSMUST00000223779 366 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Mir320-201ENSMUST00000083594 82 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Mir151-201ENSMUST00000083678 68 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Gm22829-201ENSMUST00000083771 106 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Olfr1160-201ENSMUST00000099839 960 ntBASIC0.82□□□□□ -2.28
Trav4d-3A0A075B625 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm14238-201ENSMUST00000120227 323 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm15120-201ENSMUST00000120602 301 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm16428-201ENSMUST00000121193 723 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 n-R5s15-201ENSMUST00000122635 111 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm25335-201ENSMUST00000158043 103 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm7592-201ENSMUST00000160674 627 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm38075-201ENSMUST00000191979 920 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm37533-201ENSMUST00000193848 545 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Snord43-201ENSMUST00000199549 108 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm45013-201ENSMUST00000206883 178 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 AC117656.3-204ENSMUST00000225656 859 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Mir323-201ENSMUST00000083683 86 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm10360-201ENSMUST00000097219 272 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav4d-3A0A075B625 Gm22761-201ENSMUST00000102278 96 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm25759-201ENSMUST00000103988 129 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm22270-201ENSMUST00000104034 132 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm13806-201ENSMUST00000117822 325 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm12071-201ENSMUST00000121968 469 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm23559-201ENSMUST00000157824 103 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Mir5129-201ENSMUST00000174938 78 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Mir7091-201ENSMUST00000184075 79 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Npn2-202ENSMUST00000189275 235 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm45146-201ENSMUST00000207108 221 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Gm45023-201ENSMUST00000207951 379 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 AC113031.2-201ENSMUST00000226132 579 ntBASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trav4d-3A0A075B625 Mir137-201ENSMUST00000083635 73 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 158 ms