Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm14987-201ENSMUST00000117820 676 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm12053-201ENSMUST00000119022 252 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm14647-201ENSMUST00000119392 680 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm24784-201ENSMUST00000157640 62 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm24505-201ENSMUST00000157682 126 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm24213-201ENSMUST00000158255 258 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Mir5129-201ENSMUST00000174938 78 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm23053-201ENSMUST00000175136 96 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm11395-201ENSMUST00000181011 499 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Mir6386-201ENSMUST00000183558 104 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Mir8103-201ENSMUST00000183945 107 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm27773-201ENSMUST00000184087 78 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm8151-201ENSMUST00000184817 871 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm29216-201ENSMUST00000187117 492 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm28299-201ENSMUST00000189908 339 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm28414-201ENSMUST00000190111 294 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm28098-201ENSMUST00000191361 699 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm37281-201ENSMUST00000192412 439 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm8041-201ENSMUST00000199755 616 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm7675-201ENSMUST00000208828 686 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm22229-201ENSMUST00000082987 108 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Mir21a-201ENSMUST00000083521 92 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
H2afb1S4R1E0 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.97
H2afb1S4R1E0 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm25727-201ENSMUST00000104522 131 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm13761-201ENSMUST00000117238 807 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm14657-201ENSMUST00000117461 302 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm13728-201ENSMUST00000117471 400 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm15175-201ENSMUST00000117629 132 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm12806-201ENSMUST00000119384 268 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm14867-201ENSMUST00000120156 866 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm11522-201ENSMUST00000120533 176 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm15120-201ENSMUST00000120602 301 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm8840-201ENSMUST00000122454 386 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm23326-201ENSMUST00000157419 105 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm22380-201ENSMUST00000157479 95 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm3370-201ENSMUST00000171785 500 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm22851-201ENSMUST00000178741 94 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm25074-201ENSMUST00000178782 94 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm28534-201ENSMUST00000187744 676 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm19694-201ENSMUST00000192364 505 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm42665-201ENSMUST00000202100 586 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm43991-201ENSMUST00000203751 274 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm30155-201ENSMUST00000223458 339 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm25202-201ENSMUST00000082838 191 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm24533-201ENSMUST00000083138 196 ntBASIC2.77□□□□□ -1.97
H2afb1S4R1E0 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
H2afb1S4R1E0 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Gm26075-201ENSMUST00000104062 121 ntBASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Gm25420-201ENSMUST00000104216 127 ntBASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Gm14841-201ENSMUST00000121067 758 ntBASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Gm13368-201ENSMUST00000122443 430 ntBASIC2.76□□□□□ -1.97
H2afb1S4R1E0 Gm23791-201ENSMUST00000122553 293 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms