Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm12328-201ENSMUST00000118611 197 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm24666-201ENSMUST00000158937 167 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm27286-201ENSMUST00000184934 179 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm44429-201ENSMUST00000203542 186 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 AC132615.1-201ENSMUST00000213873 255 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nubp1Q9R060 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nubp1Q9R060 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.71□□□□□ -1.66
Nubp1Q9R060 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm13491-201ENSMUST00000118267 235 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm22870-201ENSMUST00000157501 112 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm37682-201ENSMUST00000191776 522 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm17966-201ENSMUST00000193453 594 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm43925-201ENSMUST00000203498 206 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm17999-201ENSMUST00000211568 542 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm22456-201ENSMUST00000082578 125 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm24453-201ENSMUST00000083346 76 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm23095-201ENSMUST00000083446 107 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm25895-201ENSMUST00000083714 100 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.7□□□□□ -1.66
Nubp1Q9R060 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nubp1Q9R060 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm37773-201ENSMUST00000194141 2120 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm43300-201ENSMUST00000198540 2043 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm23294-201ENSMUST00000104150 164 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm7079-201ENSMUST00000119726 171 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm14500-201ENSMUST00000121647 113 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm23197-201ENSMUST00000158809 112 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm28650-201ENSMUST00000188413 411 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm23370-202ENSMUST00000197008 129 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm44054-201ENSMUST00000203814 372 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.69□□□□□ -1.66
Nubp1Q9R060 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nubp1Q9R060 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.68□□□□□ -1.66
Nubp1Q9R060 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Nubp1Q9R060 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nubp1Q9R060 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nubp1Q9R060 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.68□□□□□ -1.66
Nubp1Q9R060 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nubp1Q9R060 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nubp1Q9R060 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nubp1Q9R060 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nubp1Q9R060 Gm11774-201ENSMUST00000118601 293 ntBASIC4.68□□□□□ -1.66
Nubp1Q9R060 Gm12443-201ENSMUST00000122308 323 ntBASIC4.68□□□□□ -1.66
Nubp1Q9R060 n-R5s150-201ENSMUST00000122705 108 ntBASIC4.68□□□□□ -1.66
Nubp1Q9R060 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms