Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm18488-201ENSMUST00000215082 364 ntBASIC2.43□□□□□ -2.02
Upk3aQ9JKX8 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Upk3aQ9JKX8 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.43□□□□□ -2.02
Upk3aQ9JKX8 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Upk3aQ9JKX8 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.43□□□□□ -2.02
Upk3aQ9JKX8 Zfp640-202ENSMUST00000224116 1562 ntBASIC2.43□□□□□ -2.02
Upk3aQ9JKX8 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Upk3aQ9JKX8 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm24068-201ENSMUST00000104513 132 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm26341-201ENSMUST00000104561 134 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm23588-201ENSMUST00000157659 99 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm24086-201ENSMUST00000175171 98 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm27527-201ENSMUST00000183903 99 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm8392-201ENSMUST00000185647 835 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm37081-201ENSMUST00000192034 196 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm44125-201ENSMUST00000203068 448 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 AC153968.2-201ENSMUST00000215579 1140 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm9068-201ENSMUST00000217393 455 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm32300-201ENSMUST00000221735 515 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm22622-201ENSMUST00000082870 129 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm23516-201ENSMUST00000093728 107 ntBASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Upk3aQ9JKX8 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Mir344c-201ENSMUST00000103919 92 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm14843-201ENSMUST00000119596 212 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm25808-201ENSMUST00000122784 284 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm23599-201ENSMUST00000157261 251 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm24212-201ENSMUST00000158258 132 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Mir8103-201ENSMUST00000183945 107 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm37709-201ENSMUST00000195074 600 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm42578-201ENSMUST00000199960 194 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm43026-201ENSMUST00000202972 325 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm44041-201ENSMUST00000203678 396 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Olfr895-201ENSMUST00000093864 951 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.41□□□□□ -2.02
Upk3aQ9JKX8 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Upk3aQ9JKX8 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm14594-201ENSMUST00000118052 537 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm14359-201ENSMUST00000118883 424 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm14590-201ENSMUST00000118934 537 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm14360-201ENSMUST00000120670 393 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm12238-201ENSMUST00000127764 124 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm14333-201ENSMUST00000130484 264 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm9498-201ENSMUST00000140849 291 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Mir3076-201ENSMUST00000175415 60 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm21894-201ENSMUST00000179631 546 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm14596-201ENSMUST00000180268 537 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm14595-201ENSMUST00000180335 537 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Upk3aQ9JKX8 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.39□□□□□ -2.03
Upk3aQ9JKX8 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Upk3aQ9JKX8 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Upk3aQ9JKX8 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms