Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn5aQ9JJV9 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm23011-201ENSMUST00000104148 132 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm15266-201ENSMUST00000119635 255 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm12213-201ENSMUST00000119924 353 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm26101-201ENSMUST00000157246 105 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm24212-201ENSMUST00000158258 132 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm26173-201ENSMUST00000158416 136 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Gm46146-201ENSMUST00000217483 346 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 AC114916.1-201ENSMUST00000228465 494 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.58□□□□□ -2
Scn5aQ9JJV9 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn5aQ9JJV9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm11285-201ENSMUST00000118443 322 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm13751-201ENSMUST00000120280 752 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm16533-201ENSMUST00000140035 228 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm25365-201ENSMUST00000158852 121 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Mir496b-201ENSMUST00000184935 113 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm43810-201ENSMUST00000201018 232 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.57□□□□□ -2
Scn5aQ9JJV9 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn5aQ9JJV9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm12748-201ENSMUST00000120763 504 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm13424-201ENSMUST00000122301 354 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm4916-201ENSMUST00000126139 642 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm23583-201ENSMUST00000158533 289 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm16232-201ENSMUST00000162856 167 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm37281-201ENSMUST00000192412 439 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm37692-201ENSMUST00000192633 232 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 AC167192.1-201ENSMUST00000225908 139 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm26341-201ENSMUST00000104561 134 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm15177-201ENSMUST00000120491 577 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm12706-201ENSMUST00000121588 698 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm12443-201ENSMUST00000122308 323 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm26099-201ENSMUST00000157248 109 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm25902-201ENSMUST00000158493 318 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm23473-201ENSMUST00000158883 116 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm26960-201ENSMUST00000182263 412 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Mir7026-201ENSMUST00000184384 67 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Mir7226-201ENSMUST00000184953 60 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm27919-201ENSMUST00000185163 107 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm43043-201ENSMUST00000196579 412 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm18410-201ENSMUST00000207199 577 ntBASIC2.56□□□□□ -2
Scn5aQ9JJV9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Scn5aQ9JJV9 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms