Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm25203-201ENSMUST00000082842 215 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Trim54Q9ERP3 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm23747-201ENSMUST00000104228 131 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm11221-201ENSMUST00000117230 597 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm8840-201ENSMUST00000122454 386 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm25807-201ENSMUST00000122783 305 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm12238-201ENSMUST00000127764 124 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm14389-201ENSMUST00000140453 241 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm27783-201ENSMUST00000183534 105 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm38109-201ENSMUST00000195386 181 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm22061-201ENSMUST00000082557 107 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Trim54Q9ERP3 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm22834-201ENSMUST00000102021 79 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm24119-201ENSMUST00000103979 246 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm14647-201ENSMUST00000119392 680 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm15190-201ENSMUST00000120855 276 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm14530-201ENSMUST00000122391 333 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm23332-201ENSMUST00000157424 275 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm25902-201ENSMUST00000158493 318 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm22532-201ENSMUST00000158822 140 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm24819-201ENSMUST00000175094 166 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm20698-201ENSMUST00000175657 233 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm29104-201ENSMUST00000186304 222 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm44041-201ENSMUST00000203678 396 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm45772-201ENSMUST00000212961 240 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 AC150314.1-201ENSMUST00000214798 238 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 AC147101.1-201ENSMUST00000217964 312 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm25853-201ENSMUST00000082793 132 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm10242-201ENSMUST00000090064 330 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trim54Q9ERP3 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm14518-201ENSMUST00000117351 542 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm2066-201ENSMUST00000118046 389 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm15760-201ENSMUST00000119553 283 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm15167-201ENSMUST00000121997 187 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm11834-201ENSMUST00000122257 585 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm14364-201ENSMUST00000129209 267 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm26101-201ENSMUST00000157246 105 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm24061-201ENSMUST00000157489 120 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm22516-201ENSMUST00000158266 124 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm19932-201ENSMUST00000177033 313 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm27588-201ENSMUST00000185096 263 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm43704-201ENSMUST00000196164 496 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm43007-201ENSMUST00000197618 291 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm44472-201ENSMUST00000204922 943 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms