Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm43659-201ENSMUST00000200894 628 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45150-201ENSMUST00000206051 467 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm18414-201ENSMUST00000210858 694 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc3Q9D6Y1 Gm26154-201ENSMUST00000102339 96 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm22755-201ENSMUST00000157143 100 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25391-201ENSMUST00000157342 134 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25120-201ENSMUST00000180148 79 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45049-201ENSMUST00000207586 591 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm44656-201ENSMUST00000208428 490 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45288-201ENSMUST00000210236 151 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25799-201ENSMUST00000082643 107 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm21286-201ENSMUST00000098035 545 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Ccdc3Q9D6Y1 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm6444-201ENSMUST00000119611 458 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm2830-201ENSMUST00000140330 385 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm16510-201ENSMUST00000153501 249 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm22083-201ENSMUST00000157586 102 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm22192-201ENSMUST00000175128 85 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm29192-201ENSMUST00000190942 377 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm43083-201ENSMUST00000199594 476 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45772-201ENSMUST00000212961 240 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25632-201ENSMUST00000083112 85 ntBASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Ccdc3Q9D6Y1 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm12697-201ENSMUST00000118008 667 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm14600-201ENSMUST00000121032 630 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm16354-201ENSMUST00000155376 150 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm20698-201ENSMUST00000175657 233 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm44083-201ENSMUST00000203114 337 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm31849-201ENSMUST00000220306 375 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm2544-201ENSMUST00000222702 756 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm10038-201ENSMUST00000077233 441 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm25403-201ENSMUST00000082971 143 ntBASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm649-201ENSMUST00000117284 1054 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm11490-201ENSMUST00000118128 272 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm13454-201ENSMUST00000118166 483 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm7429-201ENSMUST00000118664 348 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms