Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.57□□□□□ -2
Ssr1Q9CY50 Gm18026-201ENSMUST00000222789 727 ntBASIC2.57□□□□□ -2
Ssr1Q9CY50 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ssr1Q9CY50 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ssr1Q9CY50 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ssr1Q9CY50 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ssr1Q9CY50 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm13194-201ENSMUST00000142299 311 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm20648-201ENSMUST00000175815 328 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Ssr1Q9CY50 Mir6993-201ENSMUST00000184912 65 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm28282-201ENSMUST00000186072 186 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.56□□□□□ -2
Ssr1Q9CY50 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm37989-201ENSMUST00000195202 803 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm37119-201ENSMUST00000195691 389 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm44161-201ENSMUST00000203532 253 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm25403-201ENSMUST00000082971 143 ntBASIC2.56□□□□□ -2
Ssr1Q9CY50 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ssr1Q9CY50 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ssr1Q9CY50 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm23387-201ENSMUST00000158586 107 ntBASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm4540-201ENSMUST00000170669 429 ntBASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm18397-201ENSMUST00000176704 587 ntBASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm27532-201ENSMUST00000183726 113 ntBASIC2.55□□□□□ -2
Ssr1Q9CY50 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm28627-201ENSMUST00000186141 453 ntBASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm38268-201ENSMUST00000195813 193 ntBASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.55□□□□□ -2
Ssr1Q9CY50 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm7429-201ENSMUST00000118664 348 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm25066-201ENSMUST00000158145 123 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm24210-201ENSMUST00000158263 133 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm23473-201ENSMUST00000158883 116 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm23813-201ENSMUST00000175153 77 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm38075-201ENSMUST00000191979 920 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm24254-201ENSMUST00000083702 104 ntBASIC2.54□□□□□ -2
Ssr1Q9CY50 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm14238-201ENSMUST00000120227 323 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm15281-201ENSMUST00000125181 351 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm23137-201ENSMUST00000157559 107 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm23933-201ENSMUST00000178405 79 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm23860-201ENSMUST00000179446 132 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Mir6411-201ENSMUST00000183556 108 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm18964-201ENSMUST00000193013 563 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.53□□□□□ -2
Ssr1Q9CY50 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm18729-201ENSMUST00000217230 621 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Ssr1Q9CY50 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ssr1Q9CY50 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.53□□□□□ -2
Ssr1Q9CY50 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm26504-201ENSMUST00000102033 94 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm24907-201ENSMUST00000116932 128 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm14333-201ENSMUST00000130484 264 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm25961-201ENSMUST00000157174 135 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm23754-201ENSMUST00000157576 63 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm26502-201ENSMUST00000177732 94 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Gm25350-201ENSMUST00000177849 94 ntBASIC2.52□□□□□ -2.01
Ssr1Q9CY50 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms