Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm14681-201ENSMUST00000118047 411 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm14918-201ENSMUST00000118153 268 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm11849-201ENSMUST00000121293 261 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm24936-201ENSMUST00000122598 247 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm22452-201ENSMUST00000122804 104 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm22225-201ENSMUST00000157358 278 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm27845-201ENSMUST00000184479 114 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm30341-201ENSMUST00000194363 289 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm18982-201ENSMUST00000198118 529 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm44324-201ENSMUST00000198517 135 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm43708-201ENSMUST00000198857 961 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm32381-201ENSMUST00000203192 476 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm45101-201ENSMUST00000208327 232 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm7751-201ENSMUST00000212868 709 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm10088-201ENSMUST00000074116 423 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm10237-201ENSMUST00000078393 273 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.98□□□□□ -1.93
Ddx28Q9CWT6 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm23609-201ENSMUST00000104542 127 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm24403-201ENSMUST00000104616 130 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm14825-201ENSMUST00000113538 701 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm25509-201ENSMUST00000116985 106 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 AA413626-201ENSMUST00000121125 494 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm16428-201ENSMUST00000121193 723 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm23667-201ENSMUST00000157466 120 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm24240-201ENSMUST00000157785 135 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Mir8103-201ENSMUST00000183945 107 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm7329-201ENSMUST00000185915 210 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm42818-201ENSMUST00000198869 987 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm44472-201ENSMUST00000204922 943 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm44266-201ENSMUST00000205235 500 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ddx28Q9CWT6 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.96□□□□□ -1.93
Ddx28Q9CWT6 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm22496-201ENSMUST00000104493 88 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm12805-201ENSMUST00000117305 1048 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm14558-201ENSMUST00000117458 381 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm2066-201ENSMUST00000118046 389 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm13574-201ENSMUST00000120482 394 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm16354-201ENSMUST00000155376 150 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm9071-201ENSMUST00000165915 474 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm20450-201ENSMUST00000173652 147 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm22858-201ENSMUST00000174972 76 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm20689-201ENSMUST00000176033 279 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm25175-201ENSMUST00000178712 79 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm28591-201ENSMUST00000185259 183 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm19641-201ENSMUST00000188432 417 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm44084-201ENSMUST00000203947 409 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm45772-201ENSMUST00000212961 240 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 CT571268.1-201ENSMUST00000222320 407 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm23614-201ENSMUST00000082598 107 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm23093-201ENSMUST00000083450 102 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.96□□□□□ -1.94
Ddx28Q9CWT6 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm22590-201ENSMUST00000104247 128 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm7916-201ENSMUST00000120325 456 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm26041-201ENSMUST00000158148 108 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms