Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm27490-201ENSMUST00000184754 128 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm28069-201ENSMUST00000189926 214 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm29490-201ENSMUST00000190923 342 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm37431-201ENSMUST00000195102 111 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Gm46194-201ENSMUST00000218136 320 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 AC126554.1-201ENSMUST00000222161 271 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.06□□□□□ -1.76
Vps53Q8CCB4 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Vps53Q8CCB4 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm24889-201ENSMUST00000104388 132 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm24192-201ENSMUST00000157978 145 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm22769-201ENSMUST00000158367 98 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm25519-201ENSMUST00000158392 127 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm3470-201ENSMUST00000160819 420 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm20656-201ENSMUST00000176925 518 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm26189-201ENSMUST00000179879 107 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm29365-201ENSMUST00000189461 699 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm37692-201ENSMUST00000192633 232 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm37290-201ENSMUST00000195775 339 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm6510-201ENSMUST00000195916 574 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm44016-201ENSMUST00000203463 164 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm45375-201ENSMUST00000210338 280 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm6842-201ENSMUST00000211361 390 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Gm10237-201ENSMUST00000078393 273 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Vps53Q8CCB4 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm22195-201ENSMUST00000116861 108 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm12125-201ENSMUST00000117261 736 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm9157-201ENSMUST00000117673 225 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm12118-201ENSMUST00000119766 532 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm11229-201ENSMUST00000121993 437 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm24240-201ENSMUST00000157785 135 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm22633-201ENSMUST00000179834 107 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm26701-201ENSMUST00000181571 234 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm37313-201ENSMUST00000191673 290 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm37455-201ENSMUST00000191993 529 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm37732-201ENSMUST00000194377 316 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm37575-201ENSMUST00000195467 309 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm43723-201ENSMUST00000196886 189 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm43669-201ENSMUST00000198229 436 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm44468-201ENSMUST00000199516 105 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm42665-201ENSMUST00000202100 586 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm44718-201ENSMUST00000206886 359 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm44654-201ENSMUST00000208052 329 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm9712-201ENSMUST00000210842 311 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Vps53Q8CCB4 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm2710-201ENSMUST00000073196 603 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm23645-201ENSMUST00000083228 108 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Gm37158-201ENSMUST00000191652 5704 ntBASIC4.04□□□□□ -1.76
Vps53Q8CCB4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm23577-201ENSMUST00000103950 110 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm23530-201ENSMUST00000104564 137 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm14355-201ENSMUST00000117352 264 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm14883-201ENSMUST00000120179 157 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm11556-201ENSMUST00000120751 288 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm14333-201ENSMUST00000130484 264 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm27592-201ENSMUST00000157729 126 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm22174-201ENSMUST00000175050 125 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm22692-201ENSMUST00000175055 125 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm27634-201ENSMUST00000175060 126 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm22460-201ENSMUST00000175269 124 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm24365-201ENSMUST00000175384 125 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm44310-201ENSMUST00000175424 126 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm22639-201ENSMUST00000175591 125 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Gm24979-201ENSMUST00000178626 126 ntBASIC4.03□□□□□ -1.76
Vps53Q8CCB4 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms