Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm12368-201ENSMUST00000122251 434 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm15466-201ENSMUST00000122299 333 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm22563-201ENSMUST00000157333 269 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm22330-201ENSMUST00000158068 115 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm4076-201ENSMUST00000179230 965 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm25156-201ENSMUST00000179809 79 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm27028-201ENSMUST00000182303 399 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm8151-201ENSMUST00000184817 871 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm7654-201ENSMUST00000186738 683 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm44208-201ENSMUST00000205199 421 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm44754-201ENSMUST00000208155 400 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Gm46312-201ENSMUST00000220961 420 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Rny3-201ENSMUST00000083011 102 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.34□□□□□ -1.87
Atg4aQ8C9S8 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm16171-201ENSMUST00000118004 324 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm14918-201ENSMUST00000118153 268 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm11813-201ENSMUST00000118586 291 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm12787-201ENSMUST00000119234 396 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm11512-201ENSMUST00000119669 663 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm9225-201ENSMUST00000121921 836 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm3370-201ENSMUST00000171785 500 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Snord53-201ENSMUST00000175146 78 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm22851-201ENSMUST00000178741 94 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm25074-201ENSMUST00000178782 94 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm22631-201ENSMUST00000179656 94 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm10193-201ENSMUST00000188288 231 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm37692-201ENSMUST00000192633 232 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm8041-201ENSMUST00000199755 616 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm19572-201ENSMUST00000214326 338 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm29809-201ENSMUST00000218423 493 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm35558-203ENSMUST00000222264 204 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm23264-201ENSMUST00000083372 107 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Atg4aQ8C9S8 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm14119-201ENSMUST00000119511 235 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm12137-201ENSMUST00000119565 346 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm14877-201ENSMUST00000119803 478 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm15037-201ENSMUST00000120358 259 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm13443-201ENSMUST00000120770 555 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm15244-201ENSMUST00000121122 130 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Cfap61-214ENSMUST00000167179 183 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Mir3964-201ENSMUST00000174898 74 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm23152-201ENSMUST00000175322 116 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Mir3106-201ENSMUST00000175401 82 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm24100-201ENSMUST00000178592 79 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm24137-201ENSMUST00000180055 79 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm25528-201ENSMUST00000180264 132 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm22391-201ENSMUST00000180356 79 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm27660-201ENSMUST00000184028 208 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm27330-201ENSMUST00000184689 132 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm19694-201ENSMUST00000192364 505 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm18540-201ENSMUST00000204025 526 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm44526-201ENSMUST00000204664 121 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 AL603630.1-201ENSMUST00000214781 147 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm23614-201ENSMUST00000082598 107 ntBASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms