Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm7386-201ENSMUST00000178020 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm3657-201ENSMUST00000178170 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm7415-201ENSMUST00000178205 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm7398-201ENSMUST00000178589 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm7391-201ENSMUST00000178680 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm2092-201ENSMUST00000178887 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm7375-201ENSMUST00000179232 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm2759-201ENSMUST00000179938 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm3681-201ENSMUST00000179940 639 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Mir6374-201ENSMUST00000184003 107 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm23783-201ENSMUST00000157941 102 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm19089-201ENSMUST00000197207 613 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm25038-201ENSMUST00000082928 130 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
Col6a6Q8C6K9 Gm13355-201ENSMUST00000117996 317 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm14841-201ENSMUST00000121067 758 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm23897-201ENSMUST00000158110 158 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm25901-201ENSMUST00000158494 130 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm9613-201ENSMUST00000171662 196 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm36638-201ENSMUST00000193295 400 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 AC154276.2-201ENSMUST00000227707 309 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Mir129-2-201ENSMUST00000083577 90 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm14907-201ENSMUST00000121948 854 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm7846-201ENSMUST00000145844 274 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm22839-201ENSMUST00000158436 304 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Gm44548-201ENSMUST00000208929 192 ntBASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Col6a6Q8C6K9 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm18964-201ENSMUST00000193013 563 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm7123-201ENSMUST00000117647 213 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm13574-201ENSMUST00000120482 394 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Snora81-201ENSMUST00000157310 178 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm27477-201ENSMUST00000184649 143 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm37281-201ENSMUST00000192412 439 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Gm18982-201ENSMUST00000198118 529 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Col6a6Q8C6K9 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Gm14008-201ENSMUST00000120483 274 ntBASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Gm25198-201ENSMUST00000178574 110 ntBASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Gm28058-201ENSMUST00000186421 264 ntBASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.16□□□□□ -2.22
Col6a6Q8C6K9 Gm26421-201ENSMUST00000104279 132 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm13901-201ENSMUST00000137252 468 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm17162-201ENSMUST00000168538 473 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm44458-201ENSMUST00000196594 143 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm44607-201ENSMUST00000205611 1090 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm45049-201ENSMUST00000207586 591 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm45742-201ENSMUST00000212400 433 ntBASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC1.15□□□□□ -2.22
Col6a6Q8C6K9 AC153662.1-201ENSMUST00000222220 270 ntBASIC1.15□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms