Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm25457-201ENSMUST00000179509 107 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm27245-201ENSMUST00000184385 376 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm28627-201ENSMUST00000186141 453 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm29603-201ENSMUST00000186792 334 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm43704-201ENSMUST00000196164 496 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm42990-201ENSMUST00000199231 312 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm44485-201ENSMUST00000199569 137 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm44054-201ENSMUST00000203814 372 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm45499-201ENSMUST00000211656 280 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 AC123533.1-201ENSMUST00000227782 446 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm9818-201ENSMUST00000050900 255 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Snora2b-201ENSMUST00000084005 137 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trim47Q8C0E3 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm13321-201ENSMUST00000117101 400 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm14810-201ENSMUST00000121628 486 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm26347-201ENSMUST00000157526 131 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm22217-201ENSMUST00000157556 313 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm22601-201ENSMUST00000157595 250 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm26157-201ENSMUST00000158974 126 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm26097-201ENSMUST00000179642 93 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm27834-201ENSMUST00000183427 125 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm6651-201ENSMUST00000189471 271 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Mir376a-201ENSMUST00000197584 68 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm44261-201ENSMUST00000203337 209 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm45392-201ENSMUST00000210441 214 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Trim47Q8C0E3 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.06□□□□□ -1.6
Trim47Q8C0E3 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm14619-201ENSMUST00000120480 168 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm23906-201ENSMUST00000157573 128 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm24015-201ENSMUST00000157725 232 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Mir1967-201ENSMUST00000157789 82 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm22349-201ENSMUST00000157864 107 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm22531-201ENSMUST00000158819 140 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm17166-201ENSMUST00000172006 431 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm27535-201ENSMUST00000183814 157 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm27611-201ENSMUST00000184690 108 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm44208-201ENSMUST00000205199 421 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.05□□□□□ -1.6
Trim47Q8C0E3 AC157476.1-201ENSMUST00000215555 169 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trim47Q8C0E3 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm25421-201ENSMUST00000104218 164 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm11718-201ENSMUST00000119942 537 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm2389-201ENSMUST00000160487 189 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm16490-201ENSMUST00000165299 351 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm29610-201ENSMUST00000187749 453 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm37670-201ENSMUST00000193622 229 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 AC164304.1-201ENSMUST00000226920 272 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm26457-201ENSMUST00000082678 78 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Gm23264-201ENSMUST00000083372 107 ntBASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.04□□□□□ -1.6
Trim47Q8C0E3 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 114.7 ms