Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm14973-201ENSMUST00000117248 255 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm23402-201ENSMUST00000178130 107 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm26189-201ENSMUST00000179879 107 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm21960-201ENSMUST00000181924 452 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm44084-201ENSMUST00000203947 409 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm10237-201ENSMUST00000078393 273 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Snord35b-201ENSMUST00000082833 87 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.9□□□□□ -1.63
Usp40Q8BWR4 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm15180-201ENSMUST00000117745 492 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm23829-201ENSMUST00000157392 270 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm24780-201ENSMUST00000157635 143 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm23262-201ENSMUST00000158323 168 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm23704-201ENSMUST00000158844 340 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm42925-201ENSMUST00000197359 285 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm45678-201ENSMUST00000210509 295 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm10092-201ENSMUST00000077110 180 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm26454-201ENSMUST00000082682 107 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm22571-201ENSMUST00000082984 70 ntBASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Usp40Q8BWR4 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm15526-201ENSMUST00000112504 204 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm11582-201ENSMUST00000121041 236 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm25966-201ENSMUST00000157169 117 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm4222-201ENSMUST00000165784 470 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm22290-201ENSMUST00000177655 107 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm22583-201ENSMUST00000178031 107 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm38088-201ENSMUST00000195829 241 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm19177-201ENSMUST00000204520 613 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm45005-201ENSMUST00000206640 157 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Usp40Q8BWR4 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 AC167250.1-201ENSMUST00000213739 3813 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm23532-201ENSMUST00000104569 112 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm14049-201ENSMUST00000121009 636 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm25150-201ENSMUST00000157121 60 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm26354-201ENSMUST00000158221 129 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm23860-201ENSMUST00000179446 132 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm32033-201ENSMUST00000193483 339 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm19726-201ENSMUST00000205008 240 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Gm44817-201ENSMUST00000205416 453 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Usp40Q8BWR4 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm23609-201ENSMUST00000104542 127 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm24831-201ENSMUST00000116778 126 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm13406-201ENSMUST00000121991 256 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms