Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.83□□□□□ -1.96
Ccdc40Q8BI79 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Ccdc40Q8BI79 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Ccdc40Q8BI79 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc40Q8BI79 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc40Q8BI79 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.83□□□□□ -1.96
Ccdc40Q8BI79 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Gm14868-201ENSMUST00000117840 216 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Gm9071-201ENSMUST00000165915 474 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Gm21638-201ENSMUST00000179473 836 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Mir7242-201ENSMUST00000183710 79 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Gm6140-201ENSMUST00000192494 966 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Gm26458-201ENSMUST00000082832 128 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Snord104-201ENSMUST00000083192 70 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.82□□□□□ -1.96
Ccdc40Q8BI79 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm13510-201ENSMUST00000118659 429 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm2830-201ENSMUST00000140330 385 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm23476-201ENSMUST00000158881 274 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm24264-201ENSMUST00000179835 94 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm43955-201ENSMUST00000204332 142 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm5317-201ENSMUST00000204445 847 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.81□□□□□ -1.96
Ccdc40Q8BI79 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm24911-201ENSMUST00000157292 136 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm28113-201ENSMUST00000188280 229 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm28438-201ENSMUST00000188299 345 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm28169-201ENSMUST00000190342 345 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm43402-201ENSMUST00000197159 159 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm43669-201ENSMUST00000198229 436 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr815-201ENSMUST00000071557 951 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm25131-201ENSMUST00000082653 151 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm23247-201ENSMUST00000083373 107 ntBASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ccdc40Q8BI79 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm25500-201ENSMUST00000104426 123 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm22497-201ENSMUST00000104499 131 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm15110-201ENSMUST00000117545 881 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm12897-201ENSMUST00000120341 250 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm25294-201ENSMUST00000122791 104 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm24436-201ENSMUST00000157889 302 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm23033-201ENSMUST00000157996 134 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm26041-201ENSMUST00000158148 108 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm24879-201ENSMUST00000158386 143 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm24546-201ENSMUST00000158652 102 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm8580-201ENSMUST00000160295 464 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm3221-201ENSMUST00000164869 440 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Snord53-201ENSMUST00000175146 78 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm27786-201ENSMUST00000184337 70 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm44324-201ENSMUST00000198517 135 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm3442-201ENSMUST00000216808 710 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm30534-201ENSMUST00000217928 207 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.79□□□□□ -1.96
Ccdc40Q8BI79 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.78□□□□□ -1.96
Ccdc40Q8BI79 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Ccdc40Q8BI79 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms