Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm23610-201ENSMUST00000178659 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23092-201ENSMUST00000178688 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25709-201ENSMUST00000178844 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25547-201ENSMUST00000178877 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25312-201ENSMUST00000178972 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24722-201ENSMUST00000179017 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22969-201ENSMUST00000179018 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25101-201ENSMUST00000179057 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26378-201ENSMUST00000179093 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24873-201ENSMUST00000179101 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23934-201ENSMUST00000179111 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22623-201ENSMUST00000179244 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26243-201ENSMUST00000179260 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25737-201ENSMUST00000179274 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22618-201ENSMUST00000179376 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24182-201ENSMUST00000179419 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24242-201ENSMUST00000179440 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25064-201ENSMUST00000179535 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26295-201ENSMUST00000179690 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23712-201ENSMUST00000179713 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22823-201ENSMUST00000179754 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22360-201ENSMUST00000179775 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24978-201ENSMUST00000179782 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24967-201ENSMUST00000179791 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25173-201ENSMUST00000179794 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24870-201ENSMUST00000179897 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22288-201ENSMUST00000179904 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22645-201ENSMUST00000180010 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24565-201ENSMUST00000180099 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23805-201ENSMUST00000180129 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23512-201ENSMUST00000180237 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25327-201ENSMUST00000180263 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26058-201ENSMUST00000180294 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22418-201ENSMUST00000180326 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim56Q80VI1 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.72□□□□□ -1.65
Trim56Q80VI1 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm45403-201ENSMUST00000209453 276 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.72□□□□□ -1.65
Trim56Q80VI1 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23629-201ENSMUST00000082465 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23924-201ENSMUST00000082474 108 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22246-201ENSMUST00000082478 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22749-201ENSMUST00000082490 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22747-201ENSMUST00000082495 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23296-201ENSMUST00000082555 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22063-201ENSMUST00000082560 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26129-201ENSMUST00000082719 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24859-201ENSMUST00000082729 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23057-201ENSMUST00000082801 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26328-201ENSMUST00000082821 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26331-201ENSMUST00000082824 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Snord14e-201ENSMUST00000082857 90 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22358-201ENSMUST00000082877 122 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24205-201ENSMUST00000082953 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25405-201ENSMUST00000082973 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22628-201ENSMUST00000082988 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26324-201ENSMUST00000083073 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24535-201ENSMUST00000083140 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26497-201ENSMUST00000083146 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26496-201ENSMUST00000083150 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26127-201ENSMUST00000083193 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24456-201ENSMUST00000083198 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24458-201ENSMUST00000083204 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24018-201ENSMUST00000083232 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25794-201ENSMUST00000083286 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25790-201ENSMUST00000083293 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22295-201ENSMUST00000083311 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25127-201ENSMUST00000083336 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25583-201ENSMUST00000083413 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25577-201ENSMUST00000083414 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24414-201ENSMUST00000083434 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24861-201ENSMUST00000083459 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Mir34b-201ENSMUST00000083558 84 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24803-201ENSMUST00000083693 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23103-201ENSMUST00000083725 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22580-201ENSMUST00000083727 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24260-201ENSMUST00000083741 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm23732-201ENSMUST00000083751 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22682-201ENSMUST00000083854 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25869-201ENSMUST00000083855 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24693-201ENSMUST00000083885 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26317-201ENSMUST00000083894 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm25188-201ENSMUST00000083913 122 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22352-201ENSMUST00000083917 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm24448-201ENSMUST00000083979 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22798-201ENSMUST00000083992 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm26427-201ENSMUST00000093648 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22886-201ENSMUST00000093714 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm22170-201ENSMUST00000097247 107 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim56Q80VI1 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.72□□□□□ -1.65
Trim56Q80VI1 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim56Q80VI1 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms