Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim27Q62158 Mir8106-201ENSMUST00000184520 139 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm28474-201ENSMUST00000188501 315 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm45071-201ENSMUST00000205353 571 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm44609-201ENSMUST00000207157 460 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm6842-201ENSMUST00000211361 390 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Gm45878-201ENSMUST00000211839 241 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Trim27Q62158 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm22810-201ENSMUST00000082741 158 ntBASIC3.39□□□□□ -1.87
Trim27Q62158 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Trim27Q62158 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim27Q62158 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim27Q62158 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm12393-201ENSMUST00000117084 848 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm11221-201ENSMUST00000117230 597 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm15760-201ENSMUST00000119553 283 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm14736-201ENSMUST00000121470 336 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm24240-201ENSMUST00000157785 135 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Mir7242-201ENSMUST00000183710 79 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm27330-201ENSMUST00000184689 132 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm28755-201ENSMUST00000185773 199 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm5268-201ENSMUST00000189212 940 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm29516-201ENSMUST00000190402 468 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm44718-201ENSMUST00000206886 359 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm45232-201ENSMUST00000207811 162 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm6012-201ENSMUST00000210821 730 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.38□□□□□ -1.87
Trim27Q62158 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Trim27Q62158 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.38□□□□□ -1.87
Trim27Q62158 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Trim27Q62158 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim27Q62158 Gm12370-201ENSMUST00000117809 604 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm11356-201ENSMUST00000118974 192 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm12412-201ENSMUST00000121867 328 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.37□□□□□ -1.87
Trim27Q62158 Gm25490-201ENSMUST00000158734 130 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Snord53-201ENSMUST00000175146 78 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm22290-201ENSMUST00000177655 107 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm22583-201ENSMUST00000178031 107 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm25670-201ENSMUST00000178423 107 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm26239-201ENSMUST00000178842 107 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm24267-201ENSMUST00000179841 107 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm27698-201ENSMUST00000184060 249 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm28648-201ENSMUST00000190092 343 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm37743-201ENSMUST00000194645 376 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Trim27Q62158 Gm43804-201ENSMUST00000198280 456 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm44961-201ENSMUST00000207450 196 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim27Q62158 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim27Q62158 Gm24292-201ENSMUST00000082888 107 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 AF357428-201ENSMUST00000083815 69 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm5670-201ENSMUST00000093546 372 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim27Q62158 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim27Q62158 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.37□□□□□ -1.87
Trim27Q62158 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Trim27Q62158 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim27Q62158 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim27Q62158 Gm25376-201ENSMUST00000104340 133 ntBASIC3.36□□□□□ -1.87
Trim27Q62158 Gm25539-201ENSMUST00000116886 122 ntBASIC3.36□□□□□ -1.87
Trim27Q62158 Gm14887-201ENSMUST00000119522 663 ntBASIC3.36□□□□□ -1.87
Trim27Q62158 Gm14049-201ENSMUST00000121009 636 ntBASIC3.36□□□□□ -1.87
Trim27Q62158 Gm23183-201ENSMUST00000122595 323 ntBASIC3.36□□□□□ -1.87
Trim27Q62158 Gm22026-201ENSMUST00000122735 281 ntBASIC3.36□□□□□ -1.87
Trim27Q62158 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.36□□□□□ -1.87
Trim27Q62158 Gm26088-201ENSMUST00000157896 131 ntBASIC3.36□□□□□ -1.87
Trim27Q62158 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim27Q62158 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms