Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AC073947.3-201ENSMUST00000215576 766 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 AC160865.1-201ENSMUST00000219873 151 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm5655-201ENSMUST00000221078 901 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 n-R5s40-201ENSMUST00000082475 124 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm19074-201ENSMUST00000218915 1429 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.12□□□□□ -2.23
Trav3-1Q5R1I8 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm25308-201ENSMUST00000104171 158 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm14593-201ENSMUST00000119948 294 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm14589-201ENSMUST00000121640 727 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm16354-201ENSMUST00000155376 150 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm22534-201ENSMUST00000158173 104 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm17113-201ENSMUST00000170118 171 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm9587-201ENSMUST00000172449 454 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Mir6338-201ENSMUST00000183389 109 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Mir3473f-201ENSMUST00000183743 136 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm20058-201ENSMUST00000186939 284 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm21064-202ENSMUST00000190583 278 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm37576-201ENSMUST00000194228 372 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm43345-201ENSMUST00000199484 269 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm32381-201ENSMUST00000203192 476 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm44459-201ENSMUST00000203926 160 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm44118-201ENSMUST00000204665 229 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm44824-201ENSMUST00000207021 229 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm26206-201ENSMUST00000082908 110 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm10360-201ENSMUST00000097219 272 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Trav3-1Q5R1I8 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm22590-201ENSMUST00000104247 128 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm25727-201ENSMUST00000104522 131 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm14517-201ENSMUST00000119040 337 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm24010-201ENSMUST00000157731 282 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm23181-201ENSMUST00000158685 110 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm17655-201ENSMUST00000167969 255 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm6651-201ENSMUST00000189471 271 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm31511-201ENSMUST00000193134 657 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm42665-201ENSMUST00000202100 586 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 AC132384.5-201ENSMUST00000218562 226 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm28359-201ENSMUST00000187470 1322 ntBASIC1.1□□□□□ -2.23
Trav3-1Q5R1I8 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Mir193b-201ENSMUST00000103784 79 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm24120-201ENSMUST00000103978 129 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Mir466k-201ENSMUST00000116774 122 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm13714-201ENSMUST00000117313 221 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm11829-201ENSMUST00000121003 282 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm25153-201ENSMUST00000157118 156 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm24908-201ENSMUST00000157294 127 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm16285-201ENSMUST00000162999 347 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm17119-201ENSMUST00000163943 280 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm27711-201ENSMUST00000183802 118 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Mir7074-201ENSMUST00000183884 63 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm29509-201ENSMUST00000185716 321 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm37495-201ENSMUST00000194590 264 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 n-R5s176-201ENSMUST00000082683 109 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Gm25739-201ENSMUST00000082886 107 ntBASIC1.09□□□□□ -2.23
Trav3-1Q5R1I8 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Trav3-1Q5R1I8 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Trav3-1Q5R1I8 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.09□□□□□ -2.24
Trav3-1Q5R1I8 Gm12393-201ENSMUST00000117084 848 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Gm25660-201ENSMUST00000158470 104 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Gm24875-201ENSMUST00000158888 104 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms