Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm24118-201ENSMUST00000103972 126 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm24126-201ENSMUST00000104111 106 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm16171-201ENSMUST00000118004 324 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm12878-201ENSMUST00000118744 332 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm14049-201ENSMUST00000121009 636 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm26424-201ENSMUST00000122530 104 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm23137-201ENSMUST00000157559 107 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm25361-201ENSMUST00000179358 76 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm27028-201ENSMUST00000182303 399 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Mir6408-201ENSMUST00000183643 91 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm37029-201ENSMUST00000195773 239 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm18748-201ENSMUST00000198507 622 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm42818-201ENSMUST00000198869 987 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 AC156560.1-201ENSMUST00000221425 256 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 AC134577.1-201ENSMUST00000227572 295 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm26129-201ENSMUST00000082719 107 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm25199-201ENSMUST00000083095 104 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Trav7-2Q5R1I3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm14593-201ENSMUST00000119948 294 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm5287-201ENSMUST00000120666 598 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm12723-201ENSMUST00000120700 451 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm14564-201ENSMUST00000122159 294 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm15466-201ENSMUST00000122299 333 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm24213-201ENSMUST00000158255 258 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm24314-201ENSMUST00000158274 123 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm26061-201ENSMUST00000175584 108 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm5224-201ENSMUST00000183060 350 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm5268-201ENSMUST00000189212 940 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm43521-201ENSMUST00000197838 255 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm43107-201ENSMUST00000198729 255 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm43284-201ENSMUST00000200103 253 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm44964-201ENSMUST00000207011 273 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm22247-201ENSMUST00000082476 131 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Mir323-201ENSMUST00000083683 86 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.21□□□□□ -2.06
Trav7-2Q5R1I3 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm14899-201ENSMUST00000118673 548 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm6071-201ENSMUST00000119561 440 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm14881-201ENSMUST00000120366 372 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm12693-201ENSMUST00000121965 483 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm22187-201ENSMUST00000157819 129 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm25670-201ENSMUST00000178423 107 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm26239-201ENSMUST00000178842 107 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm24267-201ENSMUST00000179841 107 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Mir6363-201ENSMUST00000184880 114 ntBASIC2.2□□□□□ -2.06
Trav7-2Q5R1I3 Gm28534-201ENSMUST00000187744 676 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms