Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm23815-201ENSMUST00000083231 107 ntBASIC1.33□□□□□ -2.2
Trav6d-4Q5R1I0 Gm22971-201ENSMUST00000083305 97 ntBASIC1.33□□□□□ -2.2
Trav6d-4Q5R1I0 Gm23520-201ENSMUST00000093736 107 ntBASIC1.33□□□□□ -2.2
Trav6d-4Q5R1I0 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.33□□□□□ -2.2
Trav6d-4Q5R1I0 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.33□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trav6d-4Q5R1I0 Gm16383-201ENSMUST00000118122 232 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm14709-201ENSMUST00000121225 304 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm13406-201ENSMUST00000121991 256 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm24076-201ENSMUST00000158179 94 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm27898-201ENSMUST00000183987 80 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm28466-201ENSMUST00000190678 659 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm43676-201ENSMUST00000197532 540 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm7065-201ENSMUST00000222150 474 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Mir320-201ENSMUST00000083594 82 ntBASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Trav6d-4Q5R1I0 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm25832-201ENSMUST00000104140 130 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm25560-201ENSMUST00000104606 176 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm13085-201ENSMUST00000118356 171 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm5287-201ENSMUST00000120666 598 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm15692-201ENSMUST00000152173 352 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm21885-201ENSMUST00000178891 327 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm37213-201ENSMUST00000193077 586 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm43193-201ENSMUST00000197732 441 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm43901-201ENSMUST00000203247 453 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm4921-201ENSMUST00000219804 992 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm18338-201ENSMUST00000222381 560 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 AC109172.1-201ENSMUST00000227503 187 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Gm24151-201ENSMUST00000082758 141 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.31□□□□□ -2.2
Trav6d-4Q5R1I0 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm14882-201ENSMUST00000117216 218 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm24911-201ENSMUST00000157292 136 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm5277-201ENSMUST00000164923 556 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm2855-201ENSMUST00000166765 456 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm7258-201ENSMUST00000179317 300 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Mir7009-201ENSMUST00000184519 64 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Gm38281-201ENSMUST00000192301 315 ntBASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.3□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Gm26105-201ENSMUST00000157253 190 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Gm25831-201ENSMUST00000158924 163 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 AC117656.3-204ENSMUST00000225656 859 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.29□□□□□ -2.2
Trav6d-4Q5R1I0 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm13678-201ENSMUST00000118926 340 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm8217-201ENSMUST00000119136 465 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm11556-201ENSMUST00000120751 288 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm24902-201ENSMUST00000158126 123 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm29740-201ENSMUST00000193182 655 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Gm43043-201ENSMUST00000196579 412 ntBASIC1.28□□□□□ -2.2
Trav6d-4Q5R1I0 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms