Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm22658-201ENSMUST00000104196 155 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24890-201ENSMUST00000104389 102 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm15399-201ENSMUST00000118055 724 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24959-201ENSMUST00000157924 146 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Mir6338-201ENSMUST00000183389 109 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm27676-201ENSMUST00000183669 61 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm10297-201ENSMUST00000207136 651 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm9174-201ENSMUST00000078149 255 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.37□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm12656-201ENSMUST00000118149 577 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm12372-201ENSMUST00000121654 768 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm11819-201ENSMUST00000122192 372 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24836-201ENSMUST00000122609 108 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm22560-201ENSMUST00000157332 120 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm5709-201ENSMUST00000177879 1165 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm44125-201ENSMUST00000203068 448 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm43991-201ENSMUST00000203751 274 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm18488-201ENSMUST00000215082 364 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm22265-201ENSMUST00000082947 116 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav8d-2Q5R1B6 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23472-201ENSMUST00000101806 191 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26504-201ENSMUST00000102033 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm13728-201ENSMUST00000117471 400 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm2066-201ENSMUST00000118046 389 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm14940-201ENSMUST00000119309 495 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm15112-201ENSMUST00000120152 860 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm14694-201ENSMUST00000121856 282 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm16129-201ENSMUST00000152628 486 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23409-201ENSMUST00000158516 237 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24177-201ENSMUST00000158927 131 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26195-201ENSMUST00000175035 101 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26502-201ENSMUST00000177732 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25350-201ENSMUST00000177849 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24497-201ENSMUST00000177868 191 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23446-201ENSMUST00000177977 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26201-201ENSMUST00000178047 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24711-201ENSMUST00000178062 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24609-201ENSMUST00000178166 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23265-201ENSMUST00000178321 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm22812-201ENSMUST00000178329 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26246-201ENSMUST00000178388 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25155-201ENSMUST00000178450 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24760-201ENSMUST00000178530 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm22285-201ENSMUST00000178576 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm22417-201ENSMUST00000178656 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm26270-201ENSMUST00000178690 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23313-201ENSMUST00000178931 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm23089-201ENSMUST00000178947 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm24153-201ENSMUST00000179280 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Gm25597-201ENSMUST00000179388 94 ntBASIC2.35□□□□□ -2.03
Trav8d-2Q5R1B6 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms