Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm17946-201ENSMUST00000186856 538 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm29516-201ENSMUST00000190402 468 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm44295-201ENSMUST00000203805 437 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm45438-201ENSMUST00000210242 564 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm18729-201ENSMUST00000217230 621 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm46389-201ENSMUST00000223199 392 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm24254-201ENSMUST00000083702 104 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Gm23102-201ENSMUST00000083724 116 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.36□□□□□ -2.03
Upf3bQ3ULL6 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm13806-201ENSMUST00000117822 325 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm11268-201ENSMUST00000118347 267 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm14238-201ENSMUST00000120227 323 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm22083-201ENSMUST00000157586 102 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm23559-201ENSMUST00000157824 103 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Mir6338-201ENSMUST00000183389 109 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm29288-201ENSMUST00000191582 901 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm20948-201ENSMUST00000211091 449 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm46193-201ENSMUST00000219399 364 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Mir208a-201ENSMUST00000083498 83 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Mir137-201ENSMUST00000083635 73 ntBASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Upf3bQ3ULL6 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm12878-201ENSMUST00000118744 332 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm14915-201ENSMUST00000120747 204 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm16354-201ENSMUST00000155376 150 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm26186-201ENSMUST00000157689 125 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm23476-201ENSMUST00000158881 274 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm17538-201ENSMUST00000168236 327 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Mir3066-201ENSMUST00000175296 83 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm23963-201ENSMUST00000179603 77 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm27342-201ENSMUST00000183530 109 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm27861-201ENSMUST00000183920 214 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm28011-201ENSMUST00000184097 175 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm29641-201ENSMUST00000188955 259 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm35570-201ENSMUST00000198730 681 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm42665-201ENSMUST00000202100 586 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Gm25796-201ENSMUST00000082645 163 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Mir421-201ENSMUST00000083575 76 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Snord7-201ENSMUST00000083781 97 ntBASIC2.34□□□□□ -2.03
Upf3bQ3ULL6 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Upf3bQ3ULL6 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Upf3bQ3ULL6 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm14751-201ENSMUST00000117693 222 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm14815-201ENSMUST00000120060 488 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm11430-201ENSMUST00000121317 217 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm16218-201ENSMUST00000155424 388 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm25283-201ENSMUST00000157272 77 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm17119-201ENSMUST00000163943 280 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm6788-201ENSMUST00000166459 270 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm27964-201ENSMUST00000185195 62 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm21489-201ENSMUST00000189668 818 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm43587-201ENSMUST00000199590 204 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm44477-201ENSMUST00000199661 110 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm43232-201ENSMUST00000201346 364 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm31520-201ENSMUST00000203048 733 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Gm45013-201ENSMUST00000206883 178 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Upf3bQ3ULL6 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm15113-201ENSMUST00000119280 836 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm12956-201ENSMUST00000122184 414 ntBASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.32□□□□□ -2.04
Upf3bQ3ULL6 Gm24780-201ENSMUST00000157635 143 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 243.9 ms