Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm13386-201ENSMUST00000117677 124 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm11693-201ENSMUST00000119625 565 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm12617-201ENSMUST00000121268 381 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf180Q3U827 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm24847-201ENSMUST00000158032 108 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm24358-201ENSMUST00000158424 288 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm16569-201ENSMUST00000160526 314 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm25671-201ENSMUST00000178612 105 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm23307-201ENSMUST00000179167 105 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm23963-201ENSMUST00000179603 77 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm25286-201ENSMUST00000179790 105 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm29231-201ENSMUST00000179850 319 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm43730-201ENSMUST00000199863 372 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm32222-201ENSMUST00000203296 298 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm44521-201ENSMUST00000206469 217 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm44794-201ENSMUST00000206550 411 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Gm17989-201ENSMUST00000211543 412 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 AC161572.1-201ENSMUST00000227486 640 ntBASIC4.38□□□□□ -1.71
Rnf180Q3U827 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf180Q3U827 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Rnf180Q3U827 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l9-201ENSMUST00000101891 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26504-201ENSMUST00000102033 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm15994-201ENSMUST00000118029 402 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm14972-201ENSMUST00000121780 364 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22258-201ENSMUST00000177645 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26502-201ENSMUST00000177732 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l13-201ENSMUST00000177737 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm25350-201ENSMUST00000177849 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l15-201ENSMUST00000177940 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm23446-201ENSMUST00000177977 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l4-201ENSMUST00000177982 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26201-201ENSMUST00000178047 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm24711-201ENSMUST00000178062 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm24609-201ENSMUST00000178166 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm23265-201ENSMUST00000178321 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22812-201ENSMUST00000178329 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l3-201ENSMUST00000178370 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26246-201ENSMUST00000178388 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22131-201ENSMUST00000178415 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm25155-201ENSMUST00000178450 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm24760-201ENSMUST00000178530 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26032-201ENSMUST00000178535 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22285-201ENSMUST00000178576 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22417-201ENSMUST00000178656 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l2-201ENSMUST00000178675 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26270-201ENSMUST00000178690 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l16-201ENSMUST00000178777 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm25210-201ENSMUST00000178813 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm25157-201ENSMUST00000178914 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm23313-201ENSMUST00000178931 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l17-201ENSMUST00000178936 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm23089-201ENSMUST00000178947 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22046-201ENSMUST00000179027 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l10-201ENSMUST00000179053 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm24153-201ENSMUST00000179280 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm25597-201ENSMUST00000179388 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l1-201ENSMUST00000179518 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22941-201ENSMUST00000179630 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm25816-201ENSMUST00000179764 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l8-201ENSMUST00000179889 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l7-201ENSMUST00000179895 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l5-201ENSMUST00000179927 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l6-201ENSMUST00000179955 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26188-201ENSMUST00000179963 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm25471-201ENSMUST00000180126 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26433-201ENSMUST00000180227 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Snord116l11-201ENSMUST00000180312 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm23862-201ENSMUST00000180342 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm22128-201ENSMUST00000180346 94 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm26866-201ENSMUST00000180414 802 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm27718-201ENSMUST00000183721 86 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm6651-201ENSMUST00000189471 271 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm18956-201ENSMUST00000192857 480 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Gm30534-201ENSMUST00000217928 207 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.37□□□□□ -1.71
Rnf180Q3U827 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Rnf180Q3U827 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms