Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm44490-201ENSMUST00000198566 127 ntBASIC5.12□□□□□ -1.59
Col17a1Q07563 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.12□□□□□ -1.59
Col17a1Q07563 Gm3442-201ENSMUST00000216808 710 ntBASIC5.12□□□□□ -1.59
Col17a1Q07563 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Col17a1Q07563 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
Col17a1Q07563 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Col17a1Q07563 Gm5347-201ENSMUST00000210542 2327 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm45257-201ENSMUST00000210301 3998 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col17a1Q07563 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm11438-201ENSMUST00000121582 189 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm26349-201ENSMUST00000157530 130 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm25874-201ENSMUST00000178030 79 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm18667-201ENSMUST00000186523 484 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm17929-201ENSMUST00000186851 627 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm29262-201ENSMUST00000190084 196 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm18698-201ENSMUST00000192327 668 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm44322-201ENSMUST00000196830 115 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm43114-201ENSMUST00000198298 343 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm43415-201ENSMUST00000201934 750 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm43899-201ENSMUST00000203675 246 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm19181-201ENSMUST00000218891 940 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm7198-201ENSMUST00000219635 1074 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col17a1Q07563 Gm24037-201ENSMUST00000082871 180 ntBASIC5.11□□□□□ -1.59
Col17a1Q07563 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col17a1Q07563 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col17a1Q07563 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col17a1Q07563 AC153948.1-201ENSMUST00000219080 3838 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm22021-201ENSMUST00000104353 107 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Mir466h-201ENSMUST00000104748 81 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm11784-201ENSMUST00000118568 474 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm13475-201ENSMUST00000119290 234 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm12891-201ENSMUST00000119358 240 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm25153-201ENSMUST00000157118 156 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Mir1946a-201ENSMUST00000158360 134 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm25718-201ENSMUST00000158632 118 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm25451-201ENSMUST00000177832 121 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm7858-201ENSMUST00000190177 622 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm43494-201ENSMUST00000197672 388 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm42475-201ENSMUST00000201212 295 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm43914-201ENSMUST00000203592 594 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm23731-201ENSMUST00000083749 107 ntBASIC5.1□□□□□ -1.59
Col17a1Q07563 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.1□□□□□ -1.59
Col17a1Q07563 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm7164-201ENSMUST00000117503 450 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm13510-201ENSMUST00000118659 429 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm14835-201ENSMUST00000119039 315 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm24419-201ENSMUST00000157875 332 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm28785-201ENSMUST00000187478 379 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm42672-201ENSMUST00000197821 352 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm44858-201ENSMUST00000207360 154 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm44938-201ENSMUST00000208614 427 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col17a1Q07563 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col17a1Q07563 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col17a1Q07563 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.09□□□□□ -1.59
Col17a1Q07563 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col17a1Q07563 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.09□□□□□ -1.6
Col17a1Q07563 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Col17a1Q07563 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col17a1Q07563 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm14816-201ENSMUST00000117174 294 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm12235-201ENSMUST00000118596 170 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm24885-201ENSMUST00000158783 270 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm15900-201ENSMUST00000161584 342 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm17528-201ENSMUST00000171026 239 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm20660-201ENSMUST00000177515 289 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm37658-201ENSMUST00000192672 315 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Ighv3-7-201ENSMUST00000193370 348 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col17a1Q07563 AC154521.1-201ENSMUST00000222635 330 ntBASIC5.08□□□□□ -1.6
Col17a1Q07563 Gm23847-201ENSMUST00000083829 110 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 162.7 ms