Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm28830-201ENSMUST00000188192 213 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm29097-201ENSMUST00000190273 422 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm42666-201ENSMUST00000201954 152 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm45498-201ENSMUST00000210346 283 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.65□□□□□ -1.67
Col6a1Q04857 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a1Q04857 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a1Q04857 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col6a1Q04857 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm22497-201ENSMUST00000104499 131 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm12568-201ENSMUST00000117362 624 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm23960-201ENSMUST00000157206 131 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm24850-201ENSMUST00000158029 119 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm22769-201ENSMUST00000158367 98 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm32340-201ENSMUST00000192883 259 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.64□□□□□ -1.67
Col6a1Q04857 Igkv11-118-201ENSMUST00000199448 346 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm45772-201ENSMUST00000212961 240 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm19790-201ENSMUST00000214414 251 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm29774-201ENSMUST00000219270 436 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm23731-201ENSMUST00000083749 107 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a1Q04857 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 BC051076-202ENSMUST00000199477 2868 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a1Q04857 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm23577-201ENSMUST00000103950 110 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm23319-201ENSMUST00000104467 131 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Mir881-201ENSMUST00000104844 78 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm12571-201ENSMUST00000118132 243 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm14838-201ENSMUST00000118913 248 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm11429-201ENSMUST00000119089 144 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm12721-201ENSMUST00000120621 268 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm5379-201ENSMUST00000120973 826 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm8200-201ENSMUST00000122390 222 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm23000-201ENSMUST00000157083 139 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm23168-201ENSMUST00000157156 143 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm22968-201ENSMUST00000157955 118 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm25486-201ENSMUST00000158726 63 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Mir6385-201ENSMUST00000184295 105 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm27608-201ENSMUST00000184822 162 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm28534-201ENSMUST00000187744 676 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm7182-201ENSMUST00000193351 732 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm43284-201ENSMUST00000200103 253 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm44389-201ENSMUST00000203795 182 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Gm17779-201ENSMUST00000213395 394 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Col6a1Q04857 AC241593.1-201ENSMUST00000224768 397 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a1Q04857 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a1Q04857 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.63□□□□□ -1.67
Col6a1Q04857 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a1Q04857 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm23892-201ENSMUST00000158105 130 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm24675-201ENSMUST00000158757 259 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm22859-201ENSMUST00000174978 122 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm34073-201ENSMUST00000195736 212 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Gm46138-201ENSMUST00000215294 426 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 Mir202-201ENSMUST00000083568 72 ntBASIC4.62□□□□□ -1.67
Col6a1Q04857 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms