Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.13□□□□□ -1.75
Msx2Q03358 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.13□□□□□ -1.75
Msx2Q03358 Gm25081-201ENSMUST00000082534 108 ntBASIC4.13□□□□□ -1.75
Msx2Q03358 Gm24611-201ENSMUST00000083272 107 ntBASIC4.13□□□□□ -1.75
Msx2Q03358 Gm26066-201ENSMUST00000083385 109 ntBASIC4.13□□□□□ -1.75
Msx2Q03358 Gm10343-201ENSMUST00000096279 348 ntBASIC4.13□□□□□ -1.75
Msx2Q03358 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Msx2Q03358 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
Msx2Q03358 Synpr-207ENSMUST00000223583 3362 ntBASIC4.13□□□□□ -1.75
Msx2Q03358 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Msx2Q03358 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Msx2Q03358 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Msx2Q03358 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Msx2Q03358 Gm24605-201ENSMUST00000104772 96 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm6274-201ENSMUST00000118173 797 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm12719-201ENSMUST00000118859 241 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm12808-201ENSMUST00000120597 404 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm25278-201ENSMUST00000157267 120 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm23209-201ENSMUST00000158667 110 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm25834-201ENSMUST00000158916 101 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm29330-201ENSMUST00000190032 699 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm43730-201ENSMUST00000199863 372 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.12□□□□□ -1.75
Msx2Q03358 Gm45315-201ENSMUST00000209283 333 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm23932-201ENSMUST00000082914 107 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Gm24410-201ENSMUST00000083433 107 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Mir31-201ENSMUST00000083474 106 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.12□□□□□ -1.75
Msx2Q03358 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Msx2Q03358 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Msx2Q03358 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Msx2Q03358 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Msx2Q03358 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Msx2Q03358 Gm24067-201ENSMUST00000104514 85 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm15002-201ENSMUST00000118406 452 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm12685-201ENSMUST00000121702 214 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm26479-201ENSMUST00000122620 106 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Msx2Q03358 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.11□□□□□ -1.75
Msx2Q03358 Gm22113-201ENSMUST00000158343 104 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm25051-201ENSMUST00000158602 249 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm27896-201ENSMUST00000175162 317 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm26318-201ENSMUST00000176507 96 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Msx2Q03358 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.11□□□□□ -1.75
Msx2Q03358 Gm19503-201ENSMUST00000187109 241 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm43250-201ENSMUST00000196536 273 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm44960-201ENSMUST00000207403 141 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm44533-201ENSMUST00000207782 268 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm8274-201ENSMUST00000219820 463 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm6049-201ENSMUST00000222369 458 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Msx2Q03358 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.11□□□□□ -1.75
Msx2Q03358 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Msx2Q03358 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.11□□□□□ -1.75
Msx2Q03358 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.11□□□□□ -1.75
Msx2Q03358 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Msx2Q03358 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Msx2Q03358 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Msx2Q03358 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Msx2Q03358 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Msx2Q03358 Gm650-201ENSMUST00000144428 1551 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Msx2Q03358 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Msx2Q03358 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Msx2Q03358 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Msx2Q03358 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.1□□□□□ -1.75
Msx2Q03358 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Msx2Q03358 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
Msx2Q03358 Gm5937-201ENSMUST00000119715 643 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm15029-201ENSMUST00000119742 199 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm24481-201ENSMUST00000157210 102 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm23781-201ENSMUST00000157940 308 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm24188-201ENSMUST00000157980 108 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm26287-201ENSMUST00000158887 81 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm3370-201ENSMUST00000171785 500 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Msx2Q03358 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm27245-201ENSMUST00000184385 376 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Mir3535-201ENSMUST00000197651 147 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm44324-201ENSMUST00000198517 135 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.1□□□□□ -1.75
Msx2Q03358 Gm44184-201ENSMUST00000204290 132 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm44208-201ENSMUST00000205199 421 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Gm45513-201ENSMUST00000210228 376 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.1□□□□□ -1.75
Msx2Q03358 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Msx2Q03358 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms