Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NcanP55066 AC167192.3-201ENSMUST00000224096 1567 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NcanP55066 Gm23128-201ENSMUST00000104257 132 ntBASIC3.17□□□□□ -1.9
NcanP55066 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NcanP55066 Gm14906-201ENSMUST00000119265 390 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm15037-201ENSMUST00000120358 259 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm12723-201ENSMUST00000120700 451 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm13511-201ENSMUST00000121167 363 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm23212-201ENSMUST00000122718 60 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.17□□□□□ -1.9
NcanP55066 Gm22793-201ENSMUST00000157227 330 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm22803-201ENSMUST00000158049 283 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm24210-201ENSMUST00000158263 133 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm25365-201ENSMUST00000158852 121 ntBASIC3.17□□□□□ -1.9
NcanP55066 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NcanP55066 Mir7026-201ENSMUST00000184384 67 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm28146-201ENSMUST00000185517 701 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm28627-201ENSMUST00000186141 453 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm28623-201ENSMUST00000187219 192 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm23128-202ENSMUST00000196578 133 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm45614-201ENSMUST00000209994 721 ntBASIC3.17□□□□□ -1.9
NcanP55066 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.17□□□□□ -1.9
NcanP55066 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.17□□□□□ -1.9
NcanP55066 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.17□□□□□ -1.9
NcanP55066 Gm7214-201ENSMUST00000222428 272 ntBASIC3.17□□□□□ -1.9
NcanP55066 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm22245-201ENSMUST00000082479 103 ntBASIC3.17□□□□□ -1.9
NcanP55066 Gm25792-201ENSMUST00000083289 100 ntBASIC3.17□□□□□ -1.9
NcanP55066 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NcanP55066 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.17□□□□□ -1.9
NcanP55066 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NcanP55066 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.17□□□□□ -1.9
NcanP55066 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NcanP55066 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NcanP55066 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NcanP55066 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NcanP55066 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NcanP55066 Gm24096-201ENSMUST00000103905 110 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm25876-201ENSMUST00000104329 119 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm15266-201ENSMUST00000119635 255 ntBASIC3.16□□□□□ -1.9
NcanP55066 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm15077-201ENSMUST00000122344 362 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NcanP55066 Gm24177-201ENSMUST00000158927 131 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm17183-201ENSMUST00000171170 493 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
NcanP55066 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NcanP55066 Gm7909-201ENSMUST00000182688 614 ntBASIC3.16□□□□□ -1.9
NcanP55066 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NcanP55066 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.16□□□□□ -1.9
NcanP55066 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NcanP55066 Gm37727-201ENSMUST00000191637 819 ntBASIC3.16□□□□□ -1.9
NcanP55066 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.16□□□□□ -1.9
NcanP55066 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm18433-202ENSMUST00000195682 196 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm43704-201ENSMUST00000196164 496 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm43652-201ENSMUST00000196219 675 ntBASIC3.16□□□□□ -1.9
NcanP55066 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NcanP55066 Gm45173-201ENSMUST00000206819 305 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm9068-201ENSMUST00000217393 455 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm5175-202ENSMUST00000219699 529 ntBASIC3.16□□□□□ -1.9
NcanP55066 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NcanP55066 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.16□□□□□ -1.9
NcanP55066 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.16□□□□□ -1.9
NcanP55066 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NcanP55066 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NcanP55066 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.15□□□□□ -1.9
NcanP55066 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NcanP55066 Gm25563-201ENSMUST00000104603 74 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
NcanP55066 Gm14292-201ENSMUST00000118761 456 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm13356-201ENSMUST00000121678 335 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.15□□□□□ -1.91
NcanP55066 Gm22561-201ENSMUST00000157331 84 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm23022-201ENSMUST00000158768 180 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.15□□□□□ -1.91
NcanP55066 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.15□□□□□ -1.91
NcanP55066 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm20718-201ENSMUST00000176058 259 ntBASIC3.15□□□□□ -1.91
NcanP55066 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NcanP55066 Gm43722-201ENSMUST00000196054 124 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm45049-201ENSMUST00000207586 591 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.15□□□□□ -1.91
NcanP55066 AC126673.2-201ENSMUST00000221052 686 ntBASIC3.15□□□□□ -1.91
NcanP55066 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.15□□□□□ -1.91
NcanP55066 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm26206-201ENSMUST00000082908 110 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm22740-201ENSMUST00000083439 109 ntBASIC3.15□□□□□ -1.91
NcanP55066 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NcanP55066 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NcanP55066 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC3.15□□□□□ -1.91
NcanP55066 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC3.15□□□□□ -1.91
NcanP55066 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.14□□□□□ -1.91
NcanP55066 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.14□□□□□ -1.91
NcanP55066 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.14□□□□□ -1.91
NcanP55066 Gm25466-201ENSMUST00000103995 132 ntBASIC3.14□□□□□ -1.91
NcanP55066 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.14□□□□□ -1.91
NcanP55066 Gm23429-201ENSMUST00000122486 149 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms