Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm24760-201ENSMUST00000178530 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm22285-201ENSMUST00000178576 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm22417-201ENSMUST00000178656 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm26270-201ENSMUST00000178690 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm23313-201ENSMUST00000178931 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm23089-201ENSMUST00000178947 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm24153-201ENSMUST00000179280 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm25597-201ENSMUST00000179388 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm28637-201ENSMUST00000179424 345 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm25816-201ENSMUST00000179764 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm26188-201ENSMUST00000179963 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm26433-201ENSMUST00000180227 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm22128-201ENSMUST00000180346 94 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm5224-201ENSMUST00000183060 350 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm17929-201ENSMUST00000186851 627 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.36□□□□□ -2.03
Sox6P40645 Gm37987-201ENSMUST00000194999 825 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.36□□□□□ -2.03
Sox6P40645 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Sox6P40645 Gm45452-201ENSMUST00000210905 177 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.36□□□□□ -2.03
Sox6P40645 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.36□□□□□ -2.03
Sox6P40645 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.36□□□□□ -2.03
Sox6P40645 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.36□□□□□ -2.03
Sox6P40645 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.36□□□□□ -2.03
Sox6P40645 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Sox6P40645 Gm26002-201ENSMUST00000101915 107 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Sox6P40645 Gm25407-201ENSMUST00000104102 134 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm12636-201ENSMUST00000117395 624 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm14007-201ENSMUST00000118288 210 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm11598-201ENSMUST00000119257 357 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm12935-201ENSMUST00000119352 246 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm11943-201ENSMUST00000119473 327 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm15106-201ENSMUST00000119691 821 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm26411-201ENSMUST00000157668 107 ntBASIC2.35□□□□□ -2.03
Sox6P40645 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
Sox6P40645 Gm27676-201ENSMUST00000183669 61 ntBASIC2.35□□□□□ -2.03
Sox6P40645 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.35□□□□□ -2.03
Sox6P40645 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.35□□□□□ -2.03
Sox6P40645 Gm37599-201ENSMUST00000193067 489 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm37037-201ENSMUST00000194475 424 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.35□□□□□ -2.03
Sox6P40645 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Gm9973-202ENSMUST00000220926 166 ntBASIC2.35□□□□□ -2.03
Sox6P40645 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.35□□□□□ -2.03
Sox6P40645 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sox6P40645 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Sox6P40645 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
Sox6P40645 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Sox6P40645 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.34□□□□□ -2.03
Sox6P40645 Gm14073-201ENSMUST00000117344 381 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm11219-201ENSMUST00000118565 358 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm14821-201ENSMUST00000121975 435 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm2830-201ENSMUST00000140330 385 ntBASIC2.34□□□□□ -2.03
Sox6P40645 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Sox6P40645 Gm24691-201ENSMUST00000157762 140 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm23033-201ENSMUST00000157996 134 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm22947-201ENSMUST00000158559 91 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm17085-201ENSMUST00000165425 502 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Sox6P40645 Gm26195-201ENSMUST00000175035 101 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.34□□□□□ -2.03
Sox6P40645 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC2.34□□□□□ -2.03
Sox6P40645 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.34□□□□□ -2.03
Sox6P40645 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.34□□□□□ -2.03
Sox6P40645 Mir7013-201ENSMUST00000183540 72 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm18692-201ENSMUST00000193047 511 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm45173-201ENSMUST00000206819 305 ntBASIC2.34□□□□□ -2.03
Sox6P40645 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.34□□□□□ -2.03
Sox6P40645 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Sox6P40645 Mir463-201ENSMUST00000093570 75 ntBASIC2.34□□□□□ -2.03
Sox6P40645 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC2.34□□□□□ -2.03
Sox6P40645 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Sox6P40645 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
Sox6P40645 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Sox6P40645 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Sox6P40645 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.33□□□□□ -2.04
Sox6P40645 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.33□□□□□ -2.04
Sox6P40645 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Sox6P40645 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Sox6P40645 Mir883a-201ENSMUST00000104824 76 ntBASIC2.33□□□□□ -2.04
Sox6P40645 Mir467h-201ENSMUST00000116759 121 ntBASIC2.33□□□□□ -2.04
Sox6P40645 Gm14736-201ENSMUST00000121470 336 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 163.2 ms