Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm25908-201ENSMUST00000157624 98 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm26320-201ENSMUST00000157742 306 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm26045-201ENSMUST00000157862 97 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm25486-201ENSMUST00000158726 63 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm17072-201ENSMUST00000166673 658 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm20534-201ENSMUST00000172957 172 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm27624-201ENSMUST00000185047 177 ntBASIC4.14□□□□□ -1.75
Usp4P35123 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.14□□□□□ -1.75
Usp4P35123 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.14□□□□□ -1.75
Usp4P35123 Gm7041-201ENSMUST00000201227 524 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm45539-201ENSMUST00000210313 428 ntBASIC4.14□□□□□ -1.75
Usp4P35123 AC163033.1-201ENSMUST00000218608 157 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Gm8274-201ENSMUST00000219820 463 ntBASIC4.14□□□□□ -1.75
Usp4P35123 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.14□□□□□ -1.75
Usp4P35123 Gm24042-201ENSMUST00000083114 103 ntBASIC4.14□□□□□ -1.75
Usp4P35123 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Usp4P35123 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp4P35123 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp4P35123 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp4P35123 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Usp4P35123 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.13□□□□□ -1.75
Usp4P35123 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Usp4P35123 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp4P35123 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm4736-201ENSMUST00000100870 380 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Usp4P35123 Gm8666-201ENSMUST00000117517 292 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm15215-201ENSMUST00000117773 489 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm13868-201ENSMUST00000122411 294 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm22453-201ENSMUST00000122801 318 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm24503-201ENSMUST00000158454 135 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm25643-201ENSMUST00000158874 103 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Mir5129-201ENSMUST00000174938 78 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Mir6372-201ENSMUST00000185114 109 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29512-201ENSMUST00000185544 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28110-201ENSMUST00000185782 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28838-201ENSMUST00000186338 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29057-201ENSMUST00000186468 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29661-201ENSMUST00000186781 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28737-201ENSMUST00000186808 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29118-201ENSMUST00000186908 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28433-201ENSMUST00000187085 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29635-201ENSMUST00000187221 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28759-201ENSMUST00000187621 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28831-201ENSMUST00000187739 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28200-201ENSMUST00000187778 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29026-201ENSMUST00000187787 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28752-201ENSMUST00000188340 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28797-201ENSMUST00000188543 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28855-201ENSMUST00000188680 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29378-201ENSMUST00000188723 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28569-201ENSMUST00000188748 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28120-201ENSMUST00000188812 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28369-201ENSMUST00000188993 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29037-201ENSMUST00000189092 313 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28909-201ENSMUST00000189406 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28705-201ENSMUST00000189548 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28861-201ENSMUST00000189681 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29180-201ENSMUST00000190003 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28939-201ENSMUST00000190351 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm28223-201ENSMUST00000190469 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29575-201ENSMUST00000190597 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29092-201ENSMUST00000190768 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm29469-201ENSMUST00000191448 315 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm9722-201ENSMUST00000194568 802 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm44354-201ENSMUST00000196017 143 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.13□□□□□ -1.75
Usp4P35123 Gm44032-201ENSMUST00000204841 166 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.13□□□□□ -1.75
Usp4P35123 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Usp4P35123 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Usp4P35123 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Usp4P35123 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp4P35123 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp4P35123 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp4P35123 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp4P35123 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.13□□□□□ -1.75
Usp4P35123 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp4P35123 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp4P35123 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Usp4P35123 Gm23319-201ENSMUST00000104467 131 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Mir875-201ENSMUST00000104698 78 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Mir1193-201ENSMUST00000116761 121 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Gm13903-201ENSMUST00000120945 193 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.12□□□□□ -1.75
Usp4P35123 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.12□□□□□ -1.75
Usp4P35123 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.12□□□□□ -1.75
Usp4P35123 Gm26149-201ENSMUST00000157432 108 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Gm24858-201ENSMUST00000158058 323 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Gm27579-201ENSMUST00000158113 63 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Usp4P35123 Gm26501-201ENSMUST00000178307 107 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Gm27695-201ENSMUST00000184301 91 ntBASIC4.12□□□□□ -1.75
Usp4P35123 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Usp4P35123 Gm43286-201ENSMUST00000197420 424 ntBASIC4.12□□□□□ -1.75
Usp4P35123 Gm44324-201ENSMUST00000198517 135 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms